AT1G74780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nodulin-like / Major Facilitator Superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nodulin-like / Major Facilitator Superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Nodulin-like / Major Facilitator Superfamily protein (TAIR:AT1G18940.1); Has 3116 Blast hits to 3052 proteins in 955 species: Archae - 29; Bacteria - 1753; Metazoa - 40; Fungi - 307; Plants - 604; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:28095916..28097912 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57618.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.50 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.57 | ||||||||||||||||||||||||||||||||
| Length | 533 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEILRTKWVA MTASIWIQCA SGASYTFGIY SAVLKSTQSY DQSTLDTVSV FKDIGANAGV FSGLLYTYAT SNRLRGRGGG IGGAGGPWVV LAVGAIQCFA 101: GYFLIWASVT GLIRKPPVPL MCLFMFLAAQ SQTFFNTANV VSAVENFADY GGTAVGIMKG FLGLSGAILI QLYETLCAGD PASFILLLAV TPTVLSLLVM 201: PLVRIYETSV ADDKKHLNGL SAVSLIIAAY LMIIIILKNT FGLSSWANIV TLVCLLVMLA LPLLIARRAQ RDGMEKTVPH DYSPLISSPK ATTSGNQSSE 301: GDSKVEAGLS ENLNLLQAMK KLSFWLLFLA MICGMGSGLS TINNIRQIGE SLRYSSVEIN SLVSLWSIWN FLGRFGAGYA SDALLHKKGW PRPLLMAATL 401: GTMSIGHLII ASGFQGNLYV GSVIVGVCYG SQWSLMPTIT SELFGIRHMG TIFNTISVAS PIGSYIFSVR LIGYIYDKTA SGEGNTCYGS HCFRLSFIIM 501: ASVAFFGFLV AIVLFFRTKT LYRQILVKRL HHR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)