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AT1G74640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24872594 (2014): plastid plastid envelope plastid inner membrane
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:18431481 (2008): plastid
  • PMID:15322131 (2004): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 202 Blast hits to 202 proteins in 71 species: Archae - 28; Bacteria - 92; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
DNASU:843803eggNOG:ENOG410IIPKeggNOG:ENOG4110VKAEMBL:AY087500EMBL:AY096648EMBL:AY117161EMBL:CP002684
EnsemblPlants:AT1G74640EnsemblPlants:AT1G74640.1entrez:843803ESTHER:arath-AT1G74640Gene3D:3.40.50.1820GeneID:843803GO:GO:0009507
GO:GO:0009535GO:GO:0009941GO:GO:0016787Gramene:AT1G74640.1hmmpanther:PTHR26374hmmpanther:PTHR26374:SF200HOGENOM:HOG000243139
InterPro:IPR029058KEGG:ath:AT1G74640OMA:SMETRYGPhylomeDB:Q8L475Proteomes:UP000006548RefSeq:NP_565087.1STRING:3702.AT1G74640.1
SUPFAM:SSF53474TAIR:AT1G74640UniGene:At.34855UniProt:Q8L475
Coordinates (TAIR10) chr1:+:28032849..28034659
Molecular Weight (calculated) 41060.40 Da
IEP (calculated) 8.55
GRAVY (calculated) -0.22
Length 370 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASAAFSIS SPPFVPFTTK IRRPFLLLTP KYPKPVSVRA SVSSISIDEK LPVQTKTSNW QWKFKGNSIG IYYEEHEREK CESAKNILMI PTISDVSTVE
101: EWRSVAKDIV QRDGDVNWRA TIVDWPGLGY SARPKMDYDT DVMEKFVVDF MNSPESPMSQ SGNDDLVIIG GGHAATLALR ATQRGLLKPS AIAAVAPTWA
201: GPLPIVFGRD SSMVSRYGML RGTLRAPGVG WMMYNMLVSN EKSIESQYKS HVYADQTNVT DAIIQSRYEL TKQKGSRYVP AAFLTGLLDP VSSREEFLQL
301: FADLEGKLPV MVMSTKGAPK RSKAEMEALR GAKGVSKFVE VEGALLPQEE YPSLVAQELY NFLQETFAKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)