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AT1G74560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAP1-related protein 1
Curator
Summary (TAIR10)
Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.
Computational
Description (TAIR10)
NAP1-related protein 1 (NRP1); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, response to cadmium ion, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 2 (TAIR:AT1G18800.1); Has 3428 Blast hits to 3032 proteins in 345 species: Archae - 1; Bacteria - 91; Metazoa - 1549; Fungi - 505; Plants - 305; Viruses - 45; Other Eukaryotes - 932 (source: NCBI BLink).
Protein Annotations
BioGrid:29016eggNOG:ENOG410XQRXeggNOG:KOG1508EMBL:AC011765EMBL:AF385720EMBL:AK316717EMBL:AY081733
EMBL:CP002684EnsemblPlants:AT1G74560EnsemblPlants:AT1G74560.1EnsemblPlants:AT1G74560.2EnsemblPlants:AT1G74560.3entrez:843797ExpressionAtlas:Q9CA59
GeneID:843797Genevisible:Q9CA59GO:GO:0005634GO:GO:0005737GO:GO:0006334GO:GO:0016444GO:GO:0042393
hmmpanther:PTHR11875hmmpanther:PTHR11875:SF60HOGENOM:HOG000232096IntAct:Q9CA59InterPro:IPR002164KEGG:ath:AT1G74560KO:K11290
ncoils:CoilOMA:CLHYLTTPANTHER:PTHR11875PaxDb:Q9CA59Pfam:PF00956Pfam:Q9CA59PhylomeDB:Q9CA59
PIR:G96774PRIDE:Q9CA59PRO:PR:Q9CA59ProteinModelPortal:Q9CA59Proteomes:UP000006548RefSeq:NP_001031282.1RefSeq:NP_001077822.1
RefSeq:NP_177596.1SMR:Q9CA59STRING:3702.AT1G74560.3SUPFAM:SSF143113TAIR:AT1G74560tair10-symbols:NRP1UniGene:At.48372
UniGene:At.66889UniProt:Q9CA59
Coordinates (TAIR10) chr1:-:28017815..28019900
Molecular Weight (calculated) 29417.30 Da
IEP (calculated) 3.96
GRAVY (calculated) -0.99
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MVADKSKKSK IEEKGEEENL EQIDAELVLS IEKLQEIQDD LEKINEKASD EVLEVEQKYN VIRKPVYDKR NEVIQSIPGF WMTAFLSHPA LGDLLTEEDQ
101: KIFKYLNSLE VEDAKDVKSG YSITFHFTSN PFFEDAKLTK TFTFLEEGTT KITATPIKWK EGKGLPNGVN HDDKKGNKRA LPEESFFTWF TDAQHKEDAG
201: DEIHDEVADI IKEDLWSNPL TYFNNDADEE DFDGDDDGDE EGEEDDDDEE EEDGEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)