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AT1G74250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV5eggNOG:KOG0717EMBL:AC020579EMBL:CP002684EnsemblPlants:AT1G74250EnsemblPlants:AT1G74250.1entrez:843765
Gene3D:1.10.287.110GeneID:843765GO:GO:0003676GO:GO:0005634GO:GO:0008270Gramene:AT1G74250.1hmmpanther:PTHR24078
hmmpanther:PTHR24078:SF232HOGENOM:HOG000193307InterPro:IPR001623InterPro:IPR003604InterPro:IPR007087InterPro:IPR015880InterPro:IPR018253
InterPro:IPR022755KEGG:ath:AT1G74250KO:K09506ncoils:CoilOMA:SEKRCHYPaxDb:Q9C911Pfam:PF00226
Pfam:PF12171Pfscan:PS50076Pfscan:PS50157PhylomeDB:Q9C911PIR:H96770PRINTS:PR00625PROSITE:PS00028
PROSITE:PS00636PROSITE:PS50076PROSITE:PS50157ProteinModelPortal:Q9C911Proteomes:UP000006548RefSeq:NP_177565.1scanprosite:PS00028
scanprosite:PS00636SMART:SM00271SMART:SM00355SMART:SM00451SMR:Q9C911STRING:3702.AT1G74250.1SUPFAM:SSF46565
SUPFAM:SSF57667TAIR:AT1G74250UniGene:At.52509UniProt:Q9C911
Coordinates (TAIR10) chr1:+:27920328..27922414
Molecular Weight (calculated) 72479.20 Da
IEP (calculated) 4.82
GRAVY (calculated) -1.31
Length 630 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSRSEKR CHYEVLGISK ESSPDEIRSS YRRLALQRHP DKLMKAAGLS EAEATAQFQE LVHAYEVLSD PKERAWYDSH RSQILFADHS SAGGSKSGGS
101: VPDLFAFFSP TVYSGYSDTG KGFYKVYYDV FNSVYLNEIK FARTLGLRMD SVREAPIMGN LESPYAQVTA FYNYWLGFCT VMDFCWVDEY DVMGGPNRKS
201: RRMMEEENKK SRKKAKREYN DTVRGLAEFV KKRDKRVIDM LVKKNAEMEK KKEEERERKK KMEKERLERA MNYEEPEWAK AHEGEDEGAG LSELEEEDDD
301: AKRKNEQLYC IVCSKKFKSE KQWKNHEQSK KHKEKVAELR ESFTDYEEEN EEEEIDGPLD SPESVEELHE KLQEELNIDN EERDVKKEVV GEADETDDEY
401: FVAEEDMQGS SESEDEDDEM TLLKKMVSGQ KNKQKNVVSK EEDEDETEVE IEGDTAEFSE FDNQKSTGRN KEAKEERNKQ NAGNDMADDT SKVQIPGEGG
501: NPDENMNATE SASGALADSQ KDEANSMEYD NRKSTGRRRR SKKGKDKNNQ GELNEKSSEA DDTQYVNRDM ESQDYKKAPR SKKSTRGMKT KGTTKKNSSN
601: ECDRCGEEFE SRTKLHKHLA DSGHATVKSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)