suba logo
AT1G74110.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.751
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 10
Curator
Summary (TAIR10)
member of CYP78A
Computational
Description (TAIR10)
cytochrome P450, family 78, subfamily A, polypeptide 10 (CYP78A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 5 (TAIR:AT1G13710.1); Has 31373 Blast hits to 31249 proteins in 1617 species: Archae - 44; Bacteria - 2867; Metazoa - 11374; Fungi - 6846; Plants - 9229; Viruses - 3; Other Eukaryotes - 1010 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G74110-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AC016662EMBL:CP002684EMBL:DQ446426EnsemblPlants:AT1G74110
EnsemblPlants:AT1G74110.1entrez:843751Gene3D:1.10.630.10GeneID:843751GO:GO:0005506GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT1G74110.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF112HOGENOM:HOG000218628
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT1G74110OMA:HEYKPERPfam:PF00067PhylomeDB:Q9C9D1
PIR:B96769PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_177551.1scanprosite:PS00086
SMR:Q9C9D1STRING:3702.AT1G74110.1SUPFAM:SSF48264TAIR:AT1G74110tair10-symbols:CYP78A10TMHMM:TMhelixUniGene:At.52504
UniProt:Q9C9D1
Coordinates (TAIR10) chr1:-:27866667..27868368
Molecular Weight (calculated) 60186.80 Da
IEP (calculated) 7.84
GRAVY (calculated) -0.06
Length 537 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)