AT1G74090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : desulfo-glucosinolate sulfotransferase 18 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
desulfo-glucosinolate sulfotransferase 18 (SOT18); FUNCTIONS IN: in 8 functions; INVOLVED IN: glucosinolate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2716 Blast hits to 2675 proteins in 177 species: Archae - 0; Bacteria - 191; Metazoa - 1688; Fungi - 1; Plants - 535; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27863003..27864055 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40467.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.50 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 350 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESETLTAKA TITTTTLPSH DETKTESTEF EKNQKRYQDL ISTFPHEKGW RPKEPLIEYG GYWWLPSLLE GCIHAQEFFQ ARPSDFLVCS YPKTGTTWLK 101: ALTFAIANRS RFDDSSNPLL KRNPHEFVPY IEIDFPFFPE VDVLKDKGNT LFSTHIPYEL LPDSVVKSGC KMVYIWREPK DTFISMWTFL HKERTELGPV 201: SNLEESFDMF CRGLSGYGPY LNHILAYWKA YQENPDRILF LKYETMRADP LPYVKSLAEF MGHGFTAEEE EKGVVEKVVN LCSFETLKNL EANKGEKDRE 301: DRPGVYANSA YFRKGKVGDW SNYLTPEMAA RIDGLMEEKF KGTGLLEHGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)