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AT1G74070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1); Has 3262 Blast hits to 3261 proteins in 458 species: Archae - 0; Bacteria - 134; Metazoa - 1442; Fungi - 557; Plants - 702; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G74070-MONOMEREC:5.2.1.8eggNOG:COG0652eggNOG:KOG0865EMBL:AC016662EMBL:AY062660EMBL:AY093323
EMBL:CP002684EnsemblPlants:AT1G74070EnsemblPlants:AT1G74070.1entrez:843747Gene3D:2.40.100.10GeneID:843747Genevisible:F4HTT6
GO:GO:0003755GO:GO:0006457GO:GO:0009507GO:GO:0009534GO:GO:0042277Gramene:AT1G74070.1hmmpanther:PTHR11071
hmmpanther:PTHR11071:SF244HOGENOM:HOG000237430InParanoid:F4HTT6InterPro:IPR002130InterPro:IPR024936InterPro:IPR029000iPTMnet:F4HTT6
KEGG:ath:AT1G74070KO:K03768OMA:YRRKEFIPANTHER:PTHR11071PaxDb:F4HTT6Pfam:F4HTT6Pfam:PF00160
Pfscan:PS50072PIR:F96768PRIDE:F4HTT6PRO:PR:F4HTT6PROSITE:PS50072ProteinModelPortal:F4HTT6Proteomes:UP000006548
RefSeq:NP_565079.1SMR:F4HTT6STRING:3702.AT1G74070.1SUPFAM:SSF50891TAIR:AT1G74070UniGene:At.27271UniProt:F4HTT6
Coordinates (TAIR10) chr1:-:27851749..27852861
Molecular Weight (calculated) 34376.70 Da
IEP (calculated) 10.04
GRAVY (calculated) -0.21
Length 317 amino acids
Sequence (TAIR10)
(BLAST)
001: MMQPNAKLLS PSAKFLPSPI EPPQHNRRTT VGAPPSLERN CKLSRRNLSK SSLLLLLTTQ TTLTPLLDFS KAQADTIANP NLTNCENRIP TKKAFIDVSI
101: DGEPIGRIII GLYGDDVPAG TARFSSIVSG KAGITYRRKD FVKIMPGYVQ HGGIRSYGVD AERATAAVGS LQNLIEEWER GKRGEICNVN KAGSVGIVVR
201: DPSKPPPKTK LVARNGKLVV EEEVIAVGPN GTEFVITAVD SPELEDSVLV IGKVLEGMGV VEKMREVKTV RDNTSSPYFR VAKVIGDKRA VVAERGFNRP
301: YSKVVVTNCG LIESQTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)