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AT1G73860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.888
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: petal, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G18410.1); Has 138507 Blast hits to 76202 proteins in 2961 species: Archae - 1220; Bacteria - 20098; Metazoa - 63175; Fungi - 11698; Plants - 7059; Viruses - 430; Other Eukaryotes - 34827 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2638-MONOMEReggNOG:COG5059eggNOG:KOG0239EMBL:AK229581EMBL:CP002684EnsemblPlants:AT1G73860EnsemblPlants:AT1G73860.1
entrez:843722Gene3D:3.40.850.10GeneID:843722GO:GO:0003777GO:GO:0005524GO:GO:0005874GO:GO:0007018
Gramene:AT1G73860.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF474HOGENOM:HOG000030262InterPro:IPR001752InterPro:IPR027417InterPro:IPR027640
KEGG:ath:AT1G73860KO:K10406ncoils:CoilOMA:HEERCLEPANTHER:PTHR24115Pfam:PF00225Pfscan:PS50067
PhylomeDB:Q0WN69PRINTS:PR00380PROSITE:PS50067Proteomes:UP000006548RefSeq:NP_177527.3SMART:SM00129SMR:Q0WN69
STRING:3702.AT1G73860.1SUPFAM:SSF52540TAIR:AT1G73860UniGene:At.34944UniProt:Q0WN69
Coordinates (TAIR10) chr1:-:27771188..27775977
Molecular Weight (calculated) 115136.00 Da
IEP (calculated) 8.45
GRAVY (calculated) -0.79
Length 1025 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNPMRDQPGS PYGDSTPRSP FSPFSPLSVD DRHRNHADTK TPRSPFSPFS PLSGDERHKS LAESKFQQAL ASSGQLDPLS PGSMHHGGHK FHEVFQMKQG
0101: RYDLQASKIS EMMKSSSLDN APTQSLLSVL NGILDESIER KNGEIPQRVA CLLRKVVQEI ERRISTQAEH LRTQNNIFKT REEKYQSRIN VLEALASGTG
0201: VEHEIATQQL RQIETEKSMW EEKKKHEEED MVKLMKQNDQ HNLEISALKQ ELETTKRKYE QQYSQIESQT KTEKSKWEEQ KKNEEEDMDK LLKENDQFNL
0301: QISALRQELE TTRKAYEQQC SQMESQTMVA TTGLESRLKE LEQEGKVVNT AKNALEERVK ELEQMGKEAH SAKNALEEKI KQLQQMEKET KTANTSLEGK
0401: IQELEQNLVM WKTKVREMEK KSESNHQRWS QKELSYKSFI DNQSQALLEL RSYSRSIKQE ILKVQENYTD QFSQLGKKLI ELSNAAENYH AVLTENRKLF
0501: NELQELKGNI RVFCRVRPFL PAQGAANTVV EYVGEDGELV VTNPTRPGKD GLRQFKFNKV YSPTASQADV FSDIRPLVRS VLDGYNVCIF AYGQTGSGKT
0601: YTMTGPDGSS EEDWGVNYRA LNDLFKISQS RKGNISYEVG VQMVEIYNEQ VLDLLSDDNS QKKTLGILST TQQNGLAVPD ASMYPVTSTS DVITLMDIGL
0701: QNRAVGSTAL NERSSRSHSI VTVHVRGKDL KTGSVLYGNL HLVDLAGSER VDRSEVTGDR LREAQHINKS LSSLGDVIFS LASKSSHVPY RNSKLTQLLQ
0801: TSLGGRAKTL MFVQLNPDAT SYSESMSTLK FAERVSGVEL GAAKTSKEGK DVRDLMEQLA SLKDTIARKD EEIERLQHQP QRLQKSMMRR KSIGHTDDIN
0901: SDTGEYSSQS RYSVTDGESL ASSAEAEYDE RLSEITSDAA SMGTQGSIDV TKRPPRISDR AKSVTAKSST SVTRPLDKLR KVATRTTSTV AKVTGLTSSS
1001: KGLASSSIKK TGSTSSLAKS SKRWA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)