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AT1G73805.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calmodulin binding protein-like
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calmodulin binding protein-like; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISQ2eggNOG:ENOG410Y9AXEMBL:AC012679EMBL:AY058126EMBL:BT023740EMBL:CP002684EnsemblPlants:AT1G73805
EnsemblPlants:AT1G73805.1entrez:843716GeneID:843716Genevisible:Q9C9T2GO:GO:0002229GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0006355GO:GO:0009617GO:GO:0009626GO:GO:0010112GO:GO:0010224GO:GO:0042742
GO:GO:0043565GO:GO:0071219GO:GO:0080142GO:GO:1900426Gramene:AT1G73805.1hmmpanther:PTHR31713hmmpanther:PTHR31713:SF15
HOGENOM:HOG000237471InParanoid:Q9C9T2InterPro:IPR012416KEGG:ath:AT1G73805OMA:SSRHINTPaxDb:Q9C9T2Pfam:PF07887
Pfam:Q9C9T2PhylomeDB:Q9C9T2PIR:D96765PRIDE:Q9C9T2PRO:PR:Q9C9T2Proteomes:UP000006548RefSeq:NP_565074.2
STRING:3702.AT1G73805.1TAIR:AT1G73805UniGene:At.17985UniProt:Q9C9T2
Coordinates (TAIR10) chr1:-:27745761..27749178
Molecular Weight (calculated) 50707.50 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.40
Length 451 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGKRLFQDL DSDQENKSEK RIKSVLPSLA SPISSVFGAL ISENTLRSVL EPVIRKVVRQ EVEYGISKRF RLSRSSSFRI EAPEATTPTL KLIFRKNLMT
101: PIFTGSKISD VDNNPLEIIL VDDSNKPVNL NRPIKLDIVA LHGDFPSGDK WTSDEFESNI IKERDGKRPL LAGEVSVTVR NGVATIGEIV FTDNSSWIRS
201: RKFRIGAKVA KGSSGQGVVV CEAMTEAIVV RDHRGELYKK HHPPMLEDEV WRLEKIGKDG AFHKKLSSRH INTVQDFLKL SVVDVDELRQ ILGPGMSDRK
301: WEVTLKHARE CILGNKLYIS RGPNFFMILN PICEVMKALI DGHVLSSQES LNQPYVKNLV RDAYSKGNFL EVGERTANEA ALLTQGDDLD QQYAASHYQN
401: IEIDKSYQQN GYVQERSTNN LEIVNEGYIT TPAEFNICFT GSSSQNHINP F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)