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AT1G73750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22274653 (2012): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G15060.1); Has 187 Blast hits to 154 proteins in 46 species: Archae - 0; Bacteria - 64; Metazoa - 8; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIMVeggNOG:ENOG410XRUPEMBL:AF419606EMBL:AY113044EMBL:CP002684EnsemblPlants:AT1G73750EnsemblPlants:AT1G73750.1
entrez:843710ESTHER:arath-At1g73750Gene3D:3.40.50.1820GeneID:843710Gramene:AT1G73750.1hmmpanther:PTHR11005hmmpanther:PTHR11005:SF30
InterPro:IPR029058KEGG:ath:AT1G73750OMA:RVALWRYPfam:PF12695PhylomeDB:Q8W568Proteomes:UP000006548RefSeq:NP_565071.1
SUPFAM:SSF53474TAIR:AT1G73750UniGene:At.27382UniProt:Q8W568
Coordinates (TAIR10) chr1:+:27736659..27738887
Molecular Weight (calculated) 49685.60 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.10
Length 452 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTLRFELSS ASFTSAVTAS SLHSHSRYFF SSVQLGRVGS SSPAITSVSR TTVNEICTAD ELHYVPVPNS DWRVALWRYL PSPKAPKRNH PLLLLSGIGT
101: NAVTYDLSPE CSFARSMSGS GFDTWILELR GAGLSSLSVD TNLGKGNNQQ RIVSNLLENF ISVSERLENV LDGGSKILGM QDRLSKRAGD FKQRFELIPH
201: YNWDFDNYLE EDVPSAMDYV RTQTKSKDGK LLAVGHSMGG ILLYALLSRC GFKGMDSGLA GVTTLASTFD YSSSGTLLKY LLPMKEPAQA INLPIMPIDT
301: MLAMAHPLMC RPPYSLSWLT ANISAPQMMD PEVIEKLVLN SLCTVPVKLL LQLTTAVDHG GLRDRTGTFC YKDHISKTNV PILALAGDWD IICPPDAVYD
401: TVKLIPEHLA TYKVVGSPGG PHYGHQDLIS GRTARNEVYP LITRFLQQQD ES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)