suba logo
AT1G73730.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ETHYLENE-INSENSITIVE3-like 3
Curator
Summary (TAIR10)
Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.
Computational
Description (TAIR10)
ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioGrid:28927eggNOG:ENOG410IJTFeggNOG:ENOG410YA8WEMBL:AC012679
EMBL:AF004215EMBL:AY070044EMBL:AY133839EMBL:CP002684
EnsemblPlants:AT1G73730EnsemblPlants:AT1G73730.1entrez:843708EvolutionaryTrace:O23116
Gene3D:1.10.3180.10GeneID:843708Genevisible:O23116GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006355
GO:GO:0009873GO:GO:0042762GO:GO:0071281Gramene:AT1G73730.1
hmmpanther:PTHR33305hmmpanther:PTHR33305:SF9HOGENOM:HOG000240021InParanoid:O23116
IntAct:O23116InterPro:IPR023278KEGG:ath:AT1G73730KO:K14514
OMA:ADIRMENPaxDb:O23116PDB:1WIJPDBsum:1WIJ
Pfam:O23116Pfam:PF04873PhylomeDB:O23116PIR:E96764
PRIDE:O23116PRO:PR:O23116ProteinModelPortal:O23116Proteomes:UP000006548
RefSeq:NP_177514.1SMR:O23116STRING:3702.AT1G73730.1SUPFAM:0050589
SUPFAM:SSF116768TAIR:AT1G73730tair10-symbols:AtEIL3tair10-symbols:ATSLIM
tair10-symbols:EIL3tair10-symbols:SLIM1UniGene:At.10811UniProt:O23116
Coordinates (TAIR10) chr1:-:27730434..27732363
Molecular Weight (calculated) 64045.00 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.87
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)