AT1G73660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.746 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein tyrosine kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27692247..27696718 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 112212.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1030 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK 0101: IPSPPNSFNA KNRAATVDDT VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE LIAYRYWNYN CLGYDDKILD 0201: GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW 0301: RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS 0401: ASPGDNDSIH VASSSNGIES SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR PIHSFTHMRS PSWTEGVSSP 0501: AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT 0601: NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG 0701: GHEPQGSGDS NHGPNSGGER ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ DLTGEALEEF RSEVRIMKKL 0801: RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY 0901: LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL 1001: KRLQKPVTGS NIPRPVPSSS SLPTEHEQKD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)