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AT1G73655.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (plastidal marker)

At1g73655-GFP
(full-length)
plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G18170.1); Has 2070 Blast hits to 2058 proteins in 711 species: Archae - 0; Bacteria - 1307; Metazoa - 68; Fungi - 22; Plants - 368; Viruses - 0; Other Eukaryotes - 305 (source: NCBI BLink).
Protein Annotations
EC:5.2.1.8eggNOG:COG0545eggNOG:KOG0552EMBL:AC012679EMBL:AY087399EMBL:BT004233EMBL:BT020474
EMBL:BT021144EMBL:CP002684EnsemblPlants:AT1G73655EnsemblPlants:AT1G73655.1entrez:843700GeneID:843700Genevisible:Q8LB65
GO:GO:0003755GO:GO:0006457GO:GO:0009543Gramene:AT1G73655.1hmmpanther:PTHR10516hmmpanther:PTHR10516:SF308HOGENOM:HOG000240354
InParanoid:Q8LB65InterPro:IPR001179InterPro:IPR023566KEGG:ath:AT1G73655OMA:YCFQTIVPANTHER:PTHR10516PaxDb:Q8LB65
Pfam:PF00254Pfam:Q8LB65Pfscan:PS50059PhylomeDB:Q8LB65PIR:E96763PRIDE:Q8LB65PRO:PR:Q8LB65
PROSITE:PS50059ProteinModelPortal:Q8LB65Proteomes:UP000006548RefSeq:NP_565069.4SMR:Q8LB65STRING:3702.AT1G73655.1SUPFAM:SSF54534
TAIR:AT1G73655UniGene:At.17986UniGene:At.34966UniProt:Q8LB65
Coordinates (TAIR10) chr1:-:27690468..27691781
Molecular Weight (calculated) 25749.80 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.14
Length 234 amino acids
Sequence (TAIR10)
(BLAST)
001: MATLFTATVP SHHRFVSPSQ HPKQSLLSQS LSVTFTENPQ PTAVVTLQEQ QLTDWITSPV TRRFGIGAGF TWAGFLAFGV VSEQMKKSRL DVFQEEDNTR
101: GLEKQEEIIL PNGIRYYDLQ VGSGATPSSG YLVVFDVKGQ VHGTEQVFVD TFGGKGKSLA MVMDSRPYSK GLCQGIEHVL RSMKAGGKRR VIIPPSLGFG
201: DRNVEFGQGL EIPPSATLDY IIEVDTVYCF QTIV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)