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AT1G73470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4735eggNOG:ENOG410IHRHEMBL:AY087877EMBL:BT030103EMBL:CP002684EnsemblPlants:AT1G73470EnsemblPlants:AT1G73470.1
entrez:843682ExpressionAtlas:Q8LAD8GeneID:843682Gramene:AT1G73470.1hmmpanther:PTHR37203hmmpanther:PTHR37203:SF2HOGENOM:HOG000057297
PhylomeDB:Q8LAD8Proteomes:UP000006548RefSeq:NP_565065.1STRING:3702.AT1G73470.3TAIR:AT1G73470UniGene:At.34989UniProt:Q8LAD8
Coordinates (TAIR10) chr1:+:27625208..27627604
Molecular Weight (calculated) 38797.30 Da
IEP (calculated) 8.98
GRAVY (calculated) 0.05
Length 351 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSVSVAVVA PPHRCPFSSH LNLNKLSLQI PRTGWRRKQL GFALASTAAS ESPSEATYDP ELRLVFELAT DSELYELEKI LFGPSYFSPL LKSIPNKGGG
101: DRLMIGQDIE VRDGFIEALE SRFLFLAADA RSTLRGWRPS YRNVLLAVRN NLNIPCSSQL PTEDLEAEIF LYLVDNFSSE ASGVFPGMWE NSEVSEAEGS
201: LELGLSKWKV ELLAALQVGA TEVQSMILKG GGMITFAKVY QLLAKKLSGK VFLEAANYQI RKEMLKKGGQ FAAINLESRA ALLAAKHGFA GAASRYIGLK
301: TAMQLLGPMM WGTLLADLVI QMLETDYARI LRAIYAFAQI RITRTYRLPC K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)