AT1G73177.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.918 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : bonsai | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development. | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
BONSAI (BNS); Has 44 Blast hits to 44 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27516721..27517352 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 7145.19 Da | ||||||||||||||||||||||||
| IEP (calculated) | 3.37 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||
| Length | 63 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
1: MAEVSLGMLI DIVDEEWMRD TLPDDDLPLP PVLAVKTDDT EETNQETQQA DAETWRDLAL DTQ | ||||||||||||||||||||||||
| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)