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AT1G73020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.794
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632); Has 1198 Blast hits to 1128 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XPYEeggNOG:KOG2513EMBL:AC008017EMBL:AY735561EMBL:CP002684EMBL:DQ653406EnsemblPlants:AT1G73020
EnsemblPlants:AT1G73020.1EnsemblPlants:AT1G73020.2entrez:843633GeneID:843633Genevisible:A0MFS9GO:GO:0005254GO:GO:0034707
Gramene:AT1G73020.1Gramene:AT1G73020.2hmmpanther:PTHR12308HOGENOM:HOG000036631InParanoid:A0MFS9InterPro:IPR007632iPTMnet:A0MFS9
KEGG:ath:AT1G73020OMA:DIMKFGLPANTHER:PTHR12308PaxDb:A0MFS9Pfam:A0MFS9Pfam:PF04547PhylomeDB:A0MFS9
PIR:F96755PRIDE:A0MFS9PRO:PR:A0MFS9ProteinModelPortal:A0MFS9Proteomes:UP000006548Reactome:R-ATH-2672351RefSeq:NP_001185388.1
RefSeq:NP_177445.2SMR:A0MFS9STRING:3702.AT1G73020.1TAIR:AT1G73020TCDB:1.A.17.1.11TMHMM:TMhelixUniGene:At.50964
UniProt:A0MFS9
Coordinates (TAIR10) chr1:-:27469714..27473181
Molecular Weight (calculated) 76809.40 Da
IEP (calculated) 8.81
GRAVY (calculated) 0.09
Length 665 amino acids
Sequence (TAIR10)
(BLAST)
001: MNGSNGEERV VHEVAMVVPK RVLEEEEGDC VEVLVTELRK KGMVVDRVVG LAHEFLKVAA PSEILGNAAA ELHIRKPTRL GIDLPFEMQG SEAFIRQPDG
101: LLFSWFERFR CYQHLIYGIV NSGGHDVTLK LDGREFCWTA GESLLRRLES EGVIKQMFPL HDELKRKELL QNWALNWWNC TNQPIDQIYS YFGAKIGVYF
201: SFLGMYTQWL IFPALLGFIV QMVDFGSLQF LALPSFFVGT ILWAALFLQF WKRKNAALLA RWQINCLVGP SQGYRFLGME WSSLPFPKEL IKNLGNERAK
301: EKEAYQRYEW FAYRKRFRND VLVIMSIICL QLPFELAYAH IFEIITSDII KYVLTAIYLL IIQYLTRLGG KVSVKLINRE INESVEYRAN SLIYKVFGLY
401: FMQTYIGIFY HVLLHRNFMT LRQVLIQRLI ISQVFWTLMD GSLPYLKYSY RKYRARTKKK MEDGSSTGKI QIASRVEKEY FKPTYSASIG VELEDGLFDD
501: SLELALQFGM IMMFACAFPL AFALAAVSNV MEIRTNALKL LVTLRRPLPR AAATIGAWLN IWQFLVVMSI CTNSALLVCL YDQEGKWKIE PGLAAILIME
601: HVLLLLKFGL SRLVPEEPAW VRASRVKNVT QAQDMYCKQL LRSISGEFNS LTKPEQEQQQ DSERF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)