suba logo
AT1G73000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : PYR1-like 3
Curator
Summary (TAIR10)
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational
Description (TAIR10)
PYR1-like 3 (PYL3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 2 (TAIR:AT2G26040.1); Has 386 Blast hits to 386 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:28850DIP:DIP-53477NeggNOG:ENOG410JSQIeggNOG:ENOG41108KF
EMBL:AC008017EMBL:AY735560EMBL:AY924726EMBL:CP002684
EnsemblPlants:AT1G73000EnsemblPlants:AT1G73000.1entrez:843631EvolutionaryTrace:Q9SSM7
Gene3D:3.30.530.20GeneID:843631Genevisible:Q9SSM7GO:GO:0004864
GO:GO:0004872GO:GO:0005634GO:GO:0005737GO:GO:0005886
GO:GO:0009738GO:GO:0010427GO:GO:0042803GO:GO:0043086
GO:GO:0080163Gramene:AT1G73000.1hmmpanther:PTHR31213hmmpanther:PTHR31213:SF7
HOGENOM:HOG000238422InParanoid:Q9SSM7IntAct:Q9SSM7InterPro:IPR019587
InterPro:IPR023393KEGG:ath:AT1G73000KO:K14496OMA:APAHAIW
PaxDb:Q9SSM7PDB:3KLXPDB:3OJIPDB:4DS8
PDB:4DSBPDB:4DSCPDB:4JDAPDBsum:3KLX
PDBsum:3OJIPDBsum:4DS8PDBsum:4DSBPDBsum:4DSC
PDBsum:4JDAPfam:PF10604Pfam:Q9SSM7PhylomeDB:Q9SSM7
PIR:D96755PRIDE:Q9SSM7PRO:PR:Q9SSM7ProteinModelPortal:Q9SSM7
Proteomes:UP000006548RefSeq:NP_177443.1SMR:Q9SSM7STRING:3702.AT1G73000.1
SUPFAM:SSF55961TAIR:AT1G73000tair10-symbols:PYL3tair10-symbols:RCAR13
UniGene:At.50963UniProt:Q9SSM7
Coordinates (TAIR10) chr1:+:27463092..27463721
Molecular Weight (calculated) 23292.70 Da
IEP (calculated) 8.69
GRAVY (calculated) -0.27
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLAPIHDPS SSSTTTTSSS TPYGLTKDEF STLDSIIRTH HTFPRSPNTC TSLIAHRVDA PAHAIWRFVR DFANPNKYKH FIKSCTIRVN GNGIKEIKVG
101: TIREVSVVSG LPASTSVEIL EVLDEEKRIL SFRVLGGEHR LNNYRSVTSV NEFVVLEKDK KKRVYSVVLE SYIVDIPQGN TEEDTRMFVD TVVKSNLQNL
201: AVISTASPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)