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AT1G72770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.506
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : homology to ABI1
Curator
Summary (TAIR10)
mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.
Computational
Description (TAIR10)
homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1); Has 6788 Blast hits to 6778 proteins in 499 species: Archae - 4; Bacteria - 382; Metazoa - 1655; Fungi - 745; Plants - 2728; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G72770-MONOMERBioCyc:ARA:GQT-2826-MONOMERBioCyc:ARA:GQT-408-MONOMERBioGrid:28828DIP:DIP-48988NEC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0698EMBL:AC010926EMBL:AJ003119EMBL:AK230171EMBL:AK318665EMBL:BT015409EMBL:CP002684
EnsemblPlants:AT1G72770EnsemblPlants:AT1G72770.1EnsemblPlants:AT1G72770.3entrez:843609EvolutionaryTrace:Q9CAJ0Gene3D:3.60.40.10GeneID:843609
Genevisible:Q9CAJ0GO:GO:0004722GO:GO:0005634GO:GO:0005737GO:GO:0009738GO:GO:0046872hmmpanther:PTHR13832
hmmpanther:PTHR13832:SF335HOGENOM:HOG000233896InParanoid:Q9CAJ0IntAct:Q9CAJ0InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655
KEGG:ath:AT1G72770KO:K14497MINT:MINT-8299472OMA:DELCKRNPANTHER:PTHR13832PaxDb:Q9CAJ0PDB:3KB3
PDB:3NMTPDB:3QN1PDB:3RT0PDB:3UJGPDB:3ZVUPDB:4DS8PDB:4LA7
PDB:4LG5PDB:4LGAPDB:4LGBPDB:4WVOPDBsum:3KB3PDBsum:3NMTPDBsum:3QN1
PDBsum:3RT0PDBsum:3UJGPDBsum:3ZVUPDBsum:4DS8PDBsum:4LA7PDBsum:4LG5PDBsum:4LGA
PDBsum:4LGBPDBsum:4WVOPfam:PF00481Pfam:Q9CAJ0Pfscan:PS51746PhylomeDB:Q9CAJ0PIR:F96752
PRIDE:Q9CAJ0PRO:PR:Q9CAJ0PROSITE:PS01032PROSITE:PS51746ProteinModelPortal:Q9CAJ0Proteomes:UP000006548RefSeq:NP_001077815.1
RefSeq:NP_001185385.1RefSeq:NP_177421.1scanprosite:PS01032SMART:SM00332SMR:Q9CAJ0STRING:3702.AT1G72770.1SUPFAM:SSF81606
TAIR:AT1G72770tair10-symbols:HAB1UniGene:At.46635UniGene:At.67356UniProt:Q9CAJ0
Coordinates (TAIR10) chr1:+:27390998..27392851
Molecular Weight (calculated) 55747.20 Da
IEP (calculated) 4.47
GRAVY (calculated) -0.18
Length 511 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)