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AT1G72750.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:23761796 (2013): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21841088 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:14730085 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : translocase inner membrane subunit 23-2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
translocase inner membrane subunit 23-2 (TIM23-2); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim23 (InterPro:IPR005681), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase of inner mitochondrial membrane 23 (TAIR:AT1G17530.1); Has 613 Blast hits to 613 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 136; Plants - 143; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Protein Annotations
BioGrid:28826eggNOG:COG5596eggNOG:KOG3324EMBL:AC010926
EMBL:AY042892EMBL:AY072498EMBL:AY088456EMBL:AY463973
EMBL:CP002684EMBL:U18126EnsemblPlants:AT1G72750EnsemblPlants:AT1G72750.1
entrez:843607GeneID:843607Genevisible:Q38820GO:GO:0005739
GO:GO:0005743GO:GO:0005744GO:GO:0015266GO:GO:0015450
GO:GO:0016020GO:GO:0030150GO:GO:0031305Gramene:AT1G72750.1
hmmpanther:PTHR15371hmmpanther:PTHR15371:SF7HOGENOM:HOG000166435InParanoid:Q38820
InterPro:IPR003397InterPro:IPR005681KEGG:ath:AT1G72750KO:K17794
OMA:IYAGMESPaxDb:Q38820Pfam:PF02466Pfam:Q38820
PhylomeDB:Q38820PIR:S71194PRIDE:Q38820PRO:PR:Q38820
Proteomes:UP000006548RefSeq:NP_177419.1STRING:3702.AT1G72750.1SwissPalm:Q38820
TAIR:AT1G72750tair10-symbols:ATTIM23-2tair10-symbols:TIM23-2TIGRfam:TIGR00983
TIGRFAMs:TIGR00983UniGene:At.358UniGene:At.75606UniProt:Q38820
Coordinates (TAIR10) chr1:+:27383577..27384143
Molecular Weight (calculated) 19879.50 Da
IEP (calculated) 9.87
GRAVY (calculated) -0.11
Length 188 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANNRSDHG SDENTRLYNP YQNYEVPINK SQYLYKLPTS PEFLFTEEAL RQRRSWGENL TFYTGTAYLG GSVAGASVGV ITGVKSFESG DTTKLKINRI
101: LNSSGQTGRT WGNRIGIIGL VYAGIESGIV AATDRDDVWT SVVAGLGTGA VCRAARGVRS AAVAGALGGL AAGAVVAGKQ IVKRYVPI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)