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AT1G72710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : casein kinase 1-like protein 2
Curator
Summary (TAIR10)
Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.
Computational
Description (TAIR10)
casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G72710-MONOMERDNASU:843603eggNOG:ENOG410XPGPeggNOG:KOG1164EMBL:AC010926EMBL:AY059850EMBL:AY943843
EMBL:BT010328EMBL:CP002684EnsemblPlants:AT1G72710EnsemblPlants:AT1G72710.1entrez:843603GeneID:843603GO:GO:0004674
GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0016055GO:GO:0018105Gramene:AT1G72710.1
hmmpanther:PTHR11909hmmpanther:PTHR11909:SF154HOGENOM:HOG000182055IntAct:Q9CAI5InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT1G72710KO:K02218OMA:MKNYEANPfam:PF00069Pfscan:PS50011PhylomeDB:Q9CAI5
PIR:H96751PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_177415.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9CAI5STRING:3702.AT1G72710.1SUPFAM:SSF56112TAIR:AT1G72710tair10-symbols:CKL2
UniGene:At.19326UniProt:Q9CAI5
Coordinates (TAIR10) chr1:+:27372553..27376178
Molecular Weight (calculated) 51881.80 Da
IEP (calculated) 10.05
GRAVY (calculated) -0.48
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)