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AT1G72530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : plastid developmental protein DAG, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plastid developmental protein DAG, putative; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 238 Blast hits to 218 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 238; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:843585eggNOG:ENOG410JC8MeggNOG:ENOG41117UHEMBL:AC010926
EMBL:BT030079EMBL:CP002684EnsemblPlants:AT1G72530EnsemblPlants:AT1G72530.1
entrez:843585ExpressionAtlas:Q9CAH0GeneID:843585Genevisible:Q9CAH0
GO:GO:0005739GO:GO:0080156hmmpanther:PTHR31346hmmpanther:PTHR31346:SF6
HOGENOM:HOG000005833PaxDb:Q9CAH0Pfam:Q9CAH0PhylomeDB:Q9CAH0
PIR:F96749PRIDE:Q9CAH0PRO:PR:Q9CAH0Proteomes:UP000006548
RefSeq:NP_177397.1STRING:3702.AT1G72530.2TAIR:AT1G72530UniGene:At.50962
UniProt:Q9CAH0
Coordinates (TAIR10) chr1:+:27312999..27313937
Molecular Weight (calculated) 21623.90 Da
IEP (calculated) 9.73
GRAVY (calculated) -0.54
Length 188 amino acids
Sequence (TAIR10)
(BLAST)
001: MARIIRRPLN LTAAVRFRLS PLSPFSGNSG SINSETTSWS ELIRVPSLVE GCDYKHWLVL MKPPNGYPTR NHIVQSFVET LAMALGSEEE AKRSIYSVST
101: KYYYAFGCRI HEPLTYKIRS LPDVKWVLPD SFIVDGDNRY GGEPFVDGEV VPYDEKYHAD WLRDQTDEDA KSGVVKKKHR RKRKKKLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)