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AT1G72250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20061580 (2010): plastid plastid envelope
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Di-glucose binding protein with Kinesin motor domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2); Has 13009 Blast hits to 12135 proteins in 495 species: Archae - 49; Bacteria - 371; Metazoa - 5707; Fungi - 1550; Plants - 1898; Viruses - 27; Other Eukaryotes - 3407 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-161-MONOMERBioCyc:ARA:GQT-162-MONOMEReggNOG:COG5059eggNOG:KOG0239EMBL:AC067754EMBL:CP002684EnsemblPlants:AT1G72250
EnsemblPlants:AT1G72250.1entrez:843557ExpressionAtlas:Q9C7T0Gene3D:3.40.850.10GeneID:843557GO:GO:0003777GO:GO:0005524
GO:GO:0005874GO:GO:0007018Gramene:AT1G72250.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF339HOGENOM:HOG000152194InterPro:IPR001752
InterPro:IPR019821InterPro:IPR021720InterPro:IPR027417InterPro:IPR027640ncoils:CoilPANTHER:PTHR24115Pfam:PF00225
Pfam:PF11721Pfscan:PS50067PhylomeDB:Q9C7T0PIR:B96746PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067
Proteomes:UP000006548RefSeq:NP_177370.1scanprosite:PS00411SMART:SM00129SMR:Q9C7T0STRING:3702.AT1G72250.2SUPFAM:SSF52540
TAIR:AT1G72250UniGene:At.35123UniProt:Q9C7T0
Coordinates (TAIR10) chr1:+:27192902..27198118
Molecular Weight (calculated) 133392.00 Da
IEP (calculated) 6.45
GRAVY (calculated) -0.56
Length 1195 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEDCCDPLLA TDASPRPESF SRSEKDIASR SRTVAMADLD SNCELSNDVD MEQSSPDLMK LEQSSDPVAL DGKVVLGFSL ASPDLVNCGA SPDLPRGSYE
0101: DSPEFSKKRR FSTELSLENG IDGSTTTTRL GRKSQVVKFS AICQTFGYEL SPESSFELPS PPGDFRESMT PVISINSGSI STDVTVEDVT FLKDEFFSGG
0201: ESITTDAVVG NEDEILLYQT ARLGNFAYKF QSLDPGDYFI DLHFAEIEFT KGPPGVISGL DLFSQVGANT PLVIEDLRML VGREGELSIR LEGVTGAAIL
0301: CGISIRKETT ATYVEETGML AVKGSTDTVL SQQTQENLVC RAEEEAEGMR SDCEQQRKEM EDMKRMVEEL KLENQQKTRE CEEALNSLSE IQNELMRKSM
0401: HVGSLGTSQR EEQMVLFIKR FDKKIEVEQI KLLEEATTYK HLVQDINEFS SHIQSRVKQD AELHENLKVK FVAGEKERKE LYNKILELKG NIRVFCRCRP
0501: LNFEETEAGV SMGIDVESTK NGEVIVMSNG FPKKSFKFDS VFGPNASQAD VFEDTAPFAT SVIDGYNVCI FAYGQTGTGK TFTMEGTQHD RGVNYRTLEN
0601: LFRIIKAREH RYNYEISVSV LEVYNEQIRD LLVPASQSAS APKRFEIRQL SEGNHHVPGL VEAPVKSIEE VWDVLKTGSN ARAVGKTTAN EHSSRSHCIH
0701: CVMVKGENLL NGECTKSKLW LVDLAGSERV AKTEVQGERL KETQNINKSL SALGDVIFAL ANKSSHIPFR NSKLTHLLQD SLGGDSKTLM FVQISPNEND
0801: QSETLCSLNF ASRVRGIELG PAKKQLDNTE LLKYKQMVEK WKQDMKGKDE QIRKMEETMY GLEAKIKERD TKNKTLQDKV KELESQLLVE RKLARQHVDT
0901: KIAEQQTKQQ TEDENNTSKR PPLTNILLGS ASKEMVNLTR PSLLESTTSY DLAPLPSGVP KYNDLSEKEN NPEMADQVHL PNKTGRFSIC AKRIPSAPAP
1001: RRSSLAPTTS TSREMVYLTR PPLSESTTSY DLPPLPNGGL KYSDLIEKVN NQEMAEQVQI PKRIGAGRSS ICAKRIPPAP RRKSFAPMPF IPITSTLTSP
1101: DEKSGANQVL CTSPKLHRSN GKTLTSILRR SIQKRMQMKP SPRQQPMRRG GGINVGMERV RLSIGNRGRL AHRVLLTNAR KAGLKETPQK QERWI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)