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AT1G72180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.924
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 222922 Blast hits to 143384 proteins in 4612 species: Archae - 143; Bacteria - 22250; Metazoa - 69718; Fungi - 11673; Plants - 90830; Viruses - 408; Other Eukaryotes - 27900 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G72180-MONOMEReggNOG:COG4886eggNOG:ENOG410IJIYEMBL:AC067754EMBL:CP002684EMBL:FJ708677EnsemblPlants:AT1G72180
EnsemblPlants:AT1G72180.1entrez:843550Gene3D:3.80.10.10GeneID:843550GO:GO:0004672GO:GO:0005524GO:GO:0016021
GO:GO:0042277GO:GO:0090548GO:GO:1902025Gramene:AT1G72180.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF97InterPro:IPR000719
InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT1G72180OMA:RRCKIAL
Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfscan:PS50011Pfscan:PS51450PhylomeDB:Q9C7T7
PIR:C96745PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450Proteomes:UP000006548RefSeq:NP_177363.1scanprosite:PS00108
SMART:SM00220SMR:Q9C7T7STRING:3702.AT1G72180.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G72180
TMHMM:TMhelixUniGene:At.28051UniGene:At.48363UniGene:At.74870UniProt:Q9C7T7
Coordinates (TAIR10) chr1:+:27164074..27167204
Molecular Weight (calculated) 107911.00 Da
IEP (calculated) 6.35
GRAVY (calculated) -0.11
Length 977 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRRPDLLRG SVVATVAATF LLFIFPPNVE STVEKQALFR FKNRLDDSHN ILQSWKPSDS PCVFRGITCD PLSGEVIGIS LGNVNLSGTI SPSISALTKL
101: STLSLPSNFI SGRIPPEIVN CKNLKVLNLT SNRLSGTIPN LSPLKSLEIL DISGNFLNGE FQSWIGNMNQ LVSLGLGNNH YEEGIIPESI GGLKKLTWLF
201: LARSNLTGKI PNSIFDLNAL DTFDIANNAI SDDFPILISR LVNLTKIELF NNSLTGKIPP EIKNLTRLRE FDISSNQLSG VLPEELGVLK ELRVFHCHEN
301: NFTGEFPSGF GDLSHLTSLS IYRNNFSGEF PVNIGRFSPL DTVDISENEF TGPFPRFLCQ NKKLQFLLAL QNEFSGEIPR SYGECKSLLR LRINNNRLSG
401: QVVEGFWSLP LAKMIDLSDN ELTGEVSPQI GLSTELSQLI LQNNRFSGKI PRELGRLTNI ERIYLSNNNL SGEIPMEVGD LKELSSLHLE NNSLTGFIPK
501: ELKNCVKLVD LNLAKNFLTG EIPNSLSQIA SLNSLDFSGN RLTGEIPASL VKLKLSFIDL SGNQLSGRIP PDLLAVGGST AFSRNEKLCV DKENAKTNQN
601: LGLSICSGYQ NVKRNSSLDG TLLFLALAIV VVVLVSGLFA LRYRVVKIRE LDSENRDINK ADAKWKIASF HQMELDVDEI CRLDEDHVIG SGSAGKVYRV
701: DLKKGGGTVA VKWLKRGGGE EGDGTEVSVA EMEILGKIRH RNVLKLYACL VGRGSRYLVF EFMENGNLYQ ALGNNIKGGL PELDWLKRYK IAVGAAKGIA
801: YLHHDCCPPI IHRDIKSSNI LLDGDYESKI ADFGVAKVAD KGYEWSCVAG THGYMAPELA YSFKATEKSD VYSFGVVLLE LVTGLRPMED EFGEGKDIVD
901: YVYSQIQQDP RNLQNVLDKQ VLSTYIEESM IRVLKMGLLC TTKLPNLRPS MREVVRKLDD ADPCVSNSQD TTGKITV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)