AT1G72040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27112159..27114248 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64608.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.05 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||
| Length | 580 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQKILCKSTT SSTPVLSTPV NSLAAGFISL GFKTPVKNLP PCSTTKPLST CFFSTSAMPT TTASVSSGGV GFSAYLQRTV HKPAPASVRF STAGYRTCRC 101: SIDGTNRAWV GRTGSWRALF CSDSTGGLTP VNATAGAVVE SEEESDGEDE DEEKDEKPVR MNRRNRSSSG SGEFVGNPDL LKIPGVGLRN QRKLVDNGIG 201: DVAELKKLYK DKFWKASQKM VDYLRSSVGI IHRNHAESIT TFIKESVDDE LKDSGPEPNL NVKKRLTFCV EGNISVGKST FLQRIANETV ELQDLVEIVP 301: EPVDKWQDVG PDHFNILDAF YSEPQRYAYT FQNYVFVTRL MQEKESASGV KPLRLMERSV FSDRMVFVRA VHEAKWMNEM EISIYDSWFD PVVSSLPGLV 401: PDGFIYLRAS PDTCHKRMML RKRAEEGGVS LKYLQDLHEK HESWLLPFES GNHGVLSVSR PSLHMDNSLH PDIKDRVFYL EGNHMHSSIQ KVPALVLDCE 501: PNIDFSRDIE AKTQYARQVA EFFEFVKKKQ ETSTEKSNSQ SPVLLPHQNG GLWMGPAGNH VPGLDLPPLD LKSLLTRPSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)