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AT1G71950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Proteinase inhibitor, propeptide
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Proteinase inhibitor, propeptide; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: negative regulation of catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor, propeptide (InterPro:IPR009020), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G11940.1); Has 894 Blast hits to 886 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 894; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1HIeggNOG:ENOG41121HNEMBL:AC021665EMBL:AK228040EMBL:BT004754EMBL:CP002684EnsemblPlants:AT1G71950
EnsemblPlants:AT1G71950.1entrez:843526GeneID:843526GO:GO:0005829GO:GO:0005886Gramene:AT1G71950.1hmmpanther:PTHR10795
hmmpanther:PTHR10795:SF316IntAct:Q9C8W7InterPro:IPR010259InterPro:IPR015500KEGG:ath:AT1G71950merops:S08.A29OMA:IVMADEY
PANTHER:PTHR10795Pfam:PF05922PhylomeDB:Q9C8W7PIR:D96742Proteomes:UP000006548RefSeq:NP_565029.1STRING:3702.AT1G71950.1
TAIR:AT1G71950TMHMM:TMhelixUniGene:At.35145UniGene:At.35146UniProt:Q9C8W7
Coordinates (TAIR10) chr1:-:27080453..27081573
Molecular Weight (calculated) 14852.70 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.03
Length 136 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTFAPGTRV YHLIIIVFFF FFCLSSFFAS IVMADEYTGE ATGSSEAKVH IIYTEKPTDE EPKTYHLRTL SSALGSEEAA KDALIYSYKE AASGFSAKLT
101: PEQVAEISKQ PGVIQVVPSQ TYQLHKPGGG GGFKLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)