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AT1G71790.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.800
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subunits of heterodimeric actin filament capping protein Capz superfamily
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, beta subunit conserved site (InterPro:IPR019771), F-actin capping protein, beta subunit (InterPro:IPR001698); Has 482 Blast hits to 480 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 143; Plants - 34; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQYDeggNOG:KOG3174EMBL:AC012654EMBL:BT029459EMBL:CP002684EnsemblPlants:AT1G71790EnsemblPlants:AT1G71790.1
entrez:843509GeneID:843509Genevisible:Q9M9G7GO:GO:0000902GO:GO:0005737GO:GO:0005884GO:GO:0007015
GO:GO:0008290GO:GO:0009408GO:GO:0030036GO:GO:0051015GO:GO:0051016GO:GO:0051693Gramene:AT1G71790.1
hmmpanther:PTHR10619HOGENOM:HOG000041208InParanoid:Q9M9G7InterPro:IPR001698InterPro:IPR019771KEGG:ath:AT1G71790KO:K10365
OMA:FDTYREMPANTHER:PTHR10619PaxDb:Q9M9G7Pfam:PF01115Pfam:Q9M9G7PhylomeDB:Q9M9G7PIR:D96740
PRIDE:Q9M9G7PRINTS:PR00192PRO:PR:Q9M9G7PROSITE:PS00231ProteinModelPortal:Q9M9G7Proteomes:UP000006548Reactome:R-ATH-983231
RefSeq:NP_177324.2scanprosite:PS00231SMR:Q9M9G7STRING:3702.AT1G71790.1SUPFAM:SSF90096TAIR:AT1G71790UniGene:At.35161
UniProt:Q9M9G7
Coordinates (TAIR10) chr1:+:26996869..26998785
Molecular Weight (calculated) 28878.40 Da
IEP (calculated) 4.47
GRAVY (calculated) -0.37
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAALGLLRR MPPKQSETAL SALLSLIPQH SSDLLSQVDL PLQVLRDIES GKDFILCEYN RDADSYRSPW SNKYLPPLED ALYPSSELRK LEVEANDIFA
101: IYRDQYYEGG ISSVYMWEDD NEGFVACFLI KKDGSKSGHG RRGCLEEGAW DAIHVIQVGS EEEEMAQYCL TSTIMLSLTT DDESSGKFGL SGSIRRQMKM
201: ELAVADGHLC NMGRMIEELE GKLRNSLDQV YFGKTREMVC TLRPPAEIVQ MRLPDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)