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AT1G71696.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.873
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : carboxypeptidase D, putative
Curator
Summary (TAIR10)
Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.
Computational
Description (TAIR10)
SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 2124 Blast hits to 1909 proteins in 351 species: Archae - 6; Bacteria - 563; Metazoa - 1124; Fungi - 40; Plants - 76; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XX0HeggNOG:KOG2649EMBL:CP002684EnsemblPlants:AT1G71696
EnsemblPlants:AT1G71696.1entrez:843499ExpressionAtlas:F4IA17Gene3D:2.60.40.1120
GeneID:843499GO:GO:0004181GO:GO:0008270GO:GO:0016021
Gramene:AT1G71696.1hmmpanther:PTHR11532hmmpanther:PTHR11532:SF54InterPro:IPR000834
InterPro:IPR008969InterPro:IPR014766KEGG:ath:AT1G71696MEROPS:M14.A02
PaxDb:F4IA17Pfam:PF00246PRIDE:F4IA17PRINTS:PR00765
PROSITE:PS00132PROSITE:PS00133ProteinModelPortal:F4IA17Proteomes:UP000006548
RefSeq:NP_177314.2scanprosite:PS00132scanprosite:PS00133SMART:SM00631
SMR:F4IA17STRING:3702.AT1G71696.2SUPFAM:SSF49464SUPFAM:SSF53187
TAIR:AT1G71696tair10-symbols:SOL1TMHMM:TMhelixUniGene:At.35173
UniProt:F4IA17
Coordinates (TAIR10) chr1:+:26967637..26970364
Molecular Weight (calculated) 48233.80 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.24
Length 422 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLLILFFIS LFEGFLERAF SIGKSVNGFP LWVIEISDRP GEIEAEPAFK YIGNVHGDEP VGRELLLRLA NWICDNYKKD PLAQMIVENV HLHIMPSLNP
101: DGFSIRKRNN ANNVDLNRDF PDQFFPFNDD LNLRQPETKA IMTWLRDIRF TASATLHGGA LVANFPWDGT EDKRKYYYAC PDDETFRFLA RIYSKSHRNM
201: SLSKEFEEGI TNGASWYPIY GGMQDWNYIY GGCFELTLEI SDNKWPKASE LSTIWDYNRK SMLNLVASLV KTGVHGRIFS LDKGKPLPGL VVVKGINYTV
301: KAHQTYADYH RLLVPGQKYE VTASSPGYKS KTTTVWLGEN AVTADFILIP ETSSRGNQLR SSCDCSCKSC GQPLLTQFFT ETNNGITLTL FVVVVFLCFL
401: LQRRVRFNLW KQRQSSRRSI TV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)