suba logo
AT1G71691.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3129 Blast hits to 3098 proteins in 148 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 23; Plants - 2886; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G71691EnsemblPlants:AT1G71691.1entrez:843496hmmpanther:PTHR22835
hmmpanther:PTHR22835:SF143Pfam:PF00657
Coordinates (TAIR10) chr1:-:26949395..26951173
Molecular Weight (calculated) 30964.10 Da
IEP (calculated) 6.10
GRAVY (calculated) -0.08
Length 283 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLVTQLLGL PLIPAYSEAT GDQVLRGVNY ASAAAGILPD TGGNFVGRIP FDQQIHNFET TLDQVASKSG GAVAIADSVT RSLFFIGMGS NDYLNNYLMP
101: NFPTRNQYNS QQFGDLLVQH YTDQLTRLYN LGGRKFVVAG LGRMGCIPSI LAQGNDGKCS EEVNQLVLPF NTNVKTMISN LNQNLPDAKF IYLDIAHMFE
201: DIVANQAAYG LTTMDKGCCG IGKNRGQITC LPFETPCPNR DQYVFWDAFH PTEKVNLIMA KKAFAGDRTV AYPINIQQLA SLN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)