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AT1G71410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARM repeat superfamily protein; FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with ARM repeat domain (TAIR:AT1G22870.1); Has 32123 Blast hits to 30004 proteins in 1636 species: Archae - 12; Bacteria - 4500; Metazoa - 10601; Fungi - 4600; Plants - 4657; Viruses - 36; Other Eukaryotes - 7717 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ9TeggNOG:KOG2137EMBL:AC016163EMBL:AK221244EMBL:CP002684EnsemblPlants:AT1G71410EnsemblPlants:AT1G71410.1
entrez:843482Gene3D:1.25.10.10GeneID:843482GO:GO:0004672GO:GO:0005524GO:GO:0016020Gramene:AT1G71410.1
hmmpanther:PTHR12984hmmpanther:PTHR12984:SF6InterPro:IPR000719InterPro:IPR011009InterPro:IPR011989InterPro:IPR016024KEGG:ath:AT1G71410
KO:K17541OMA:SINMKTFPfam:PF00069Pfscan:PS50011PhylomeDB:Q9C9H8PROSITE:PS50011Proteomes:UP000006548
RefSeq:NP_177297.1SMR:Q9C9H8STRING:3702.AT1G71410.1SUPFAM:SSF48371SUPFAM:SSF56112TAIR:AT1G71410UniGene:At.27861
UniProt:Q9C9H8
Coordinates (TAIR10) chr1:-:26913070..26917515
Molecular Weight (calculated) 98769.60 Da
IEP (calculated) 7.44
GRAVY (calculated) -0.22
Length 909 amino acids
Sequence (TAIR10)
(BLAST)
001: MSINMKTFTQ ALARTAAVIE KTVHTTVQEV TGPKALQDYE LLDQIGSAGP GLAWKLYAAK ARDSTRPQQY PTVCVWMLDK RALSEARVRA NLSKAAEDAF
101: LDLIRADAGK LVRLRHPGVV HVVQALDENK NAMALVTEPL FASVANALGN VENVGNVPKD LKSMEMSLLE VKHGLLQISE TLNFLHNNAN LIHRAISPEN
201: VLITSAGSWK LAGFGFAISA AQAGNLDNMQ SFHYSEYDVE DSILPVQPSL NYTAPELMRS KSPSAGASSD IFSFGCLAYH LVARKPLFDC NNNVKMYMNT
301: LNYITNESFS SIPSELVSDL QRMLSTNESF RPTALDFTGS NFFRSDARLR ALRFLDHLLE RDNMQKSEFL KALSDMWKDF DSRVLRYKVL PPLCAELRNL
401: VLQPIILPMV LTIAQSQDRT DFELITLPAL VPVLSTASGD TLLLLVKHAD LITNKTDSEH LVSHVLPLLL RAYNDNDVRI QEEVLKRSTS VAKQLDGQVV
501: RQAILPRVHG LALKTTVAAV RVNALLCLAE LVQTLDKPAA IEILETIQRC TAVDRSAPTL MCTLAVANAI LKQYGVEFTA EHVLTLMMPL LTAQQLNVQQ
601: FAKYMLFVKD ILRKIEEKRG VTVNDSGVPE VKPHSAANGL QFQSSTQIPE KVASAAKSSP AWDEDWGSPS KDSAVGNPAS SRHNTNDQFN KSTDQSQPSI
701: MSTLPNKTTA PTTCPAVDIE WPPRQSSSLT APATDNQTQL NTGTSFASGF DELDPFANWP PRPNNGASVA STGLKNGAAS NFSNNLPGGT HFQTANNDNW
801: AFSSASLSSL KPPQQGNQGI SANNQDPLNS FGVPKQSQGM PSFTSGSYNN QKPADISSIF GSSKTEPSAM KLAPPPSIAM GRGRGRGRGG TGTSTSKPSG
901: SQPSLLDLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)