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AT1G70760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:23667806 (2013): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : inorganic carbon transport protein-related
Curator
Summary (TAIR10)
a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.
Computational
Description (TAIR10)
CHLORORESPIRATORY REDUCTION 23 (CRR23); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: NAD(P)H dehydrogenase complex (plastoquinone), thylakoid membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit L (InterPro:IPR019654); Has 242 Blast hits to 242 proteins in 68 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1941-MONOMEREC:1.6.5.-eggNOG:ENOG410IYXDeggNOG:ENOG4112C5DEMBL:AC008148EMBL:AC011663EMBL:AK229819
EMBL:BT010638EMBL:CP002684EnsemblPlants:AT1G70760EnsemblPlants:AT1G70760.1entrez:843413GeneID:843413Genevisible:Q9CAC5
GO:GO:0006810GO:GO:0009535GO:GO:0009773GO:GO:0010258GO:GO:0010598GO:GO:0016021GO:GO:0016655
GO:GO:0042651GO:GO:0048038Gramene:AT1G70760.1hmmpanther:PTHR36727hmmpanther:PTHR36727:SF2HOGENOM:HOG000090274InterPro:IPR019654
KEGG:ath:AT1G70760OMA:MPPIIMNPaxDb:Q9CAC5Pfam:PF10716Pfam:Q9CAC5PhylomeDB:Q9CAC5PIR:B96732
PRIDE:Q9CAC5PRO:PR:Q9CAC5Proteomes:UP000006548RefSeq:NP_177233.1STRING:3702.AT1G70760.1TAIR:AT1G70760tair10-symbols:CRR23
TCDB:3.D.1.8.1TMHMM:TMhelixUniGene:At.48357UniGene:At.70098UniProt:Q9CAC5
Coordinates (TAIR10) chr1:+:26687267..26688201
Molecular Weight (calculated) 21964.10 Da
IEP (calculated) 9.85
GRAVY (calculated) 0.01
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRCGSLGLY APNALPSLSL KPRSVKSPFC ITSHTKPNDT LLHNVNKMRA KACDILGAKK TILAAQLGAV LATIDHPALA ITGVNNQQEL SSVVLDIGII
101: SVWYFLVMPP IIMNWLRVRW YRRKFFEMYL QFMFVFMFFP GLLLWAPFLN FRKFPRDPNM KNPWDKPTDP DSIKNVYLKY PYATPEDYDL D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)