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AT1G70710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:22318864 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20061580 (2010): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycosyl hydrolase 9B1
Curator
Summary (TAIR10)
endo-1,4-beta-glucanase. Involved in cell elongation.
Computational
Description (TAIR10)
glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G70710-MONOMERBioGrid:28628CAZy:GH9EC:3.2.1.4eggNOG:ENOG410IISAeggNOG:ENOG410YBFAEMBL:AC011663
EMBL:AY048283EMBL:AY074552EMBL:CP002684EMBL:X98543EMBL:X98544EnsemblPlants:AT1G70710EnsemblPlants:AT1G70710.1
entrez:843408Gene3D:1.50.10.10GeneID:843408Genevisible:Q9CAC1GO:GO:0005576GO:GO:0008810GO:GO:0009507
GO:GO:0030245GO:GO:0042547Gramene:AT1G70710.1gramene_pathway:3.2.1.4gramene_pathway:PWY-1001hmmpanther:PTHR22298hmmpanther:PTHR22298:SF28
HOGENOM:HOG000021033InParanoid:Q9CAC1InterPro:IPR001701InterPro:IPR008928InterPro:IPR012341InterPro:IPR018221InterPro:IPR033126
KEGG:00500+3.2.1.4KEGG:ath:AT1G70710MINT:MINT-8068205OMA:ADNFMCTPaxDb:Q9CAC1Pfam:PF00759Pfam:Q9CAC1
PhylomeDB:Q9CAC1PIR:E96731PRIDE:Q9CAC1PRO:PR:Q9CAC1PROSITE:PS00592PROSITE:PS00698ProteinModelPortal:Q9CAC1
Proteomes:UP000006548RefSeq:NP_177228.1scanprosite:PS00592scanprosite:PS00698SMR:Q9CAC1STRING:3702.AT1G70710.1SUPFAM:SSF48208
TAIR:AT1G70710tair10-symbols:ATGH9B1tair10-symbols:CEL1tair10-symbols:GH9B1TMHMM:TMhelixUniGene:At.21900UniGene:At.72497
UniProt:Q9CAC1
Coordinates (TAIR10) chr1:-:26659356..26662962
Molecular Weight (calculated) 54613.30 Da
IEP (calculated) 9.60
GRAVY (calculated) -0.19
Length 492 amino acids
Sequence (TAIR10)
(BLAST)
001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)