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AT1G70660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.640
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MMS ZWEI homologue 2
Curator
Summary (TAIR10)
MMZ2/UEV1B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1A can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. However, a combination of MMZ2/UEV1B and UBC13A do not do a good job of rescuing an mms2 ubc13 double mutant in yeast. MMZ2/UEV1B transcripts are found in most plant organs, but not in the pollen or in seedlings 6 hours or 2 days post-germination. The transcript levels do not appear to be stress-inducible.
Computational
Description (TAIR10)
MMS ZWEI homologue 2 (MMZ2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 3691 Blast hits to 3691 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 1966; Fungi - 516; Plants - 688; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-762-MONOMERBioCyc:ARA:GQT-763-MONOMERBioGrid:28623eggNOG:ENOG4111MDWeggNOG:KOG0896EMBL:AC011663EMBL:AY088344
EMBL:BT004011EMBL:BT004943EMBL:CP002684EnsemblPlants:AT1G70660EnsemblPlants:AT1G70660.1entrez:843403ExpressionAtlas:Q9CAB6
Gene3D:3.10.110.10GeneID:843403Genevisible:Q9CAB6GO:GO:0005634GO:GO:0005737GO:GO:0006301GO:GO:0031625
GO:GO:0061630GO:GO:0070534hmmpanther:PTHR24067hmmpanther:PTHR24067:SF118HOGENOM:HOG000036561InParanoid:Q9CAB6IntAct:Q9CAB6
InterPro:IPR000608InterPro:IPR016135PaxDb:Q9CAB6Pfam:PF00179Pfam:Q9CAB6Pfscan:PS50127PhylomeDB:Q9CAB6
PIR:H96730PRIDE:Q9CAB6PRO:PR:Q9CAB6PROSITE:PS50127ProteinModelPortal:Q9CAB6Proteomes:UP000006548RefSeq:NP_564994.1
SMR:Q9CAB6STRING:3702.AT1G70660.1SUPFAM:SSF54495TAIR:AT1G70660tair10-symbols:MMZ2tair10-symbols:UEV1BUniGene:At.18114
UniProt:Q9CAB6
Coordinates (TAIR10) chr1:+:26640755..26641949
Molecular Weight (calculated) 18001.60 Da
IEP (calculated) 4.76
GRAVY (calculated) -0.53
Length 159 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSEEEKVVV PRNFRLLEEL ERGEKGIGDG TVSYGMDDAD DILMQSWTGT ILGPHNTAYE GKIFQLKLFC GKDYPESPPT VRFQSRINMA CVNPENGVVD
101: PSHFPMLSNW RREFTMEDLL IQLKKEMMSS QNRKLAQPLE GNEEGRTDPK GLVVKCCVM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)