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AT1G70580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24130194 (2013): peroxisome
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22550958 (2012): plastid
  • PMID:21311031 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:17951448 (2007): peroxisome
  • PMID:12154131 (2002): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alanine-2-oxoglutarate aminotransferase 2
Curator
Summary (TAIR10)
Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.
Computational
Description (TAIR10)
alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast stroma, chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 25956 Blast hits to 25948 proteins in 2915 species: Archae - 710; Bacteria - 17564; Metazoa - 583; Fungi - 724; Plants - 1237; Viruses - 0; Other Eukaryotes - 5138 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2823-MONOMERBioCyc:ARA:GQT-2824-MONOMERBioCyc:ARA:GQT-2825-MONOMERBioCyc:MetaCyc:AT1G70580-MONOMER
BioGrid:28615BRENDA:2.6.1.44EC:2.6.1.-EC:2.6.1.2
EC:2.6.1.4EC:2.6.1.44eggNOG:COG0436eggNOG:KOG0258
EMBL:AC010796EMBL:AC011663EMBL:AF479640EMBL:AK316788
EMBL:AK317441EMBL:AY035130EMBL:AY062982EMBL:AY084890
EMBL:CP002684EnsemblPlants:AT1G70580EnsemblPlants:AT1G70580.1EnsemblPlants:AT1G70580.2
EnsemblPlants:AT1G70580.3EnsemblPlants:AT1G70580.4entrez:843395Gene3D:3.40.640.10
Gene3D:3.90.1150.10GeneID:843395Genevisible:Q9S7E9GO:GO:0004021
GO:GO:0005777GO:GO:0008453GO:GO:0009058GO:GO:0009507
GO:GO:0009570GO:GO:0030170GO:GO:0042853GO:GO:0047958
Gramene:AT1G70580.1Gramene:AT1G70580.2Gramene:AT1G70580.3Gramene:AT1G70580.4
gramene_pathway:2.6.1.2gramene_pathway:2.6.1.4gramene_pathway:ALANINE-DEG3-PWYgramene_pathway:ALANINE-SYN2-PWY
gramene_pathway:GLYSYN2-PWYgramene_pathway:PWY-181gramene_plant_reactome:1119330gramene_plant_reactome:6873456
hmmpanther:PTHR11751hmmpanther:PTHR11751:SF373HOGENOM:HOG000215020InParanoid:Q9S7E9
InterPro:IPR004839InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424
KEGG:ath:AT1G70580KO:K14272OMA:EESENWGPaxDb:Q9S7E9
Pfam:PF00155Pfam:Q9S7E9PhylomeDB:Q9S7E9PIR:H96729
PRIDE:Q9S7E9PRO:PR:Q9S7E9ProMEX:Q9S7E9ProteinModelPortal:Q9S7E9
Proteomes:UP000006548Reactome:R-ATH-70614RefSeq:NP_001031262.1RefSeq:NP_001031263.1
RefSeq:NP_177215.1RefSeq:NP_974122.1SABIO-RK:Q9S7E9SMR:Q9S7E9
STRING:3702.AT1G70580.1SUPFAM:SSF53383TAIR:AT1G70580tair10-symbols:AOAT2
tair10-symbols:GGT2UniGene:At.18115UniPathway:UPA00322UniPathway:UPA00528
UniProt:Q9S7E9
Coordinates (TAIR10) chr1:+:26613222..26615845
Molecular Weight (calculated) 53447.50 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.19
Length 481 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)