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AT1G70520.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.989
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22318864 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 2
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G70520-MONOMERBioGrid:28609EC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410IHAJEMBL:AC010796EMBL:AK118924
EMBL:CP002684EnsemblPlants:AT1G70520EnsemblPlants:AT1G70520.1entrez:843389Gene3D:2.60.120.200GeneID:843389Genevisible:Q9CAL3
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006952GO:GO:0009506GO:GO:0010193GO:GO:0016021
GO:GO:0046777Gramene:AT1G70520.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF70HOGENOM:HOG000116550InParanoid:Q9CAL3InterPro:IPR000719
InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441iPTMnet:Q9CAL3KEGG:ath:AT1G70520
OMA:NISKHRTPaxDb:Q9CAL3Pfam:PF00069Pfam:PF01657Pfam:Q9CAL3Pfscan:PS50011Pfscan:PS51473
PhylomeDB:Q9CAL3PIR:B96729PRIDE:Q9CAL3PRO:PR:Q9CAL3PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:Q9CAL3Proteomes:UP000006548RefSeq:NP_177209.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9CAL3STRING:3702.AT1G70520.1SUPFAM:SSF56112SwissPalm:Q9CAL3TAIR:AT1G70520tair10-symbols:CRK2TMHMM:TMhelix
UniGene:At.35295UniProt:Q9CAL3
Coordinates (TAIR10) chr1:-:26584888..26587334
Molecular Weight (calculated) 72004.40 Da
IEP (calculated) 8.56
GRAVY (calculated) -0.23
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKEPVHILP LYLPCLLMFL LSSLRQITGD ARARAVKVTC SPLLEHNETA YVPNFVATME KISTQVQTSG FGVALTGTGP DANYGLAQCY GDLPLNDCVL
101: CYAEARTMLP QCYPQNGGRI FLDGCFMRAE NYSFYNEYKG PEDSIVCGNT TRKNKTFGDA VRQGLRNAVT EASGTGGYAR ASAKAGESES ESAFVLANCW
201: RTLSPDSCKQ CLENASASVV KGCLPWSEGR ALHTGCFLRY SDQDFLNKIP RNGRSRGSVV VIVVSVLSSV VVFMIGVAVS VYICKRRTIK RKRRGSKDVE
301: KMAKTLKDSS LNFKYSTLEK ATGSFDNANK LGQGGFGTVY KGVLPDGRDI AVKRLFFNNR HRATDFYNEV NMISTVEHKN LVRLLGCSCS GPESLLVYEY
401: LQNKSLDRFI FDVNRGKTLD WQRRYTIIVG TAEGLVYLHE QSSVKIIHRD IKASNILLDS KLQAKIADFG LARSFQDDKS HISTAIAGTL GYMAPEYLAH
501: GQLTEMVDVY SFGVLVLEIV TGKQNTKSKM SDYSDSLITE AWKHFQSGEL EKIYDPNLDW KSQYDSHIIK KEIARVVQIG LLCTQEIPSL RPPMSKLLHM
601: LKNKEEVLPL PSNPPFMDER VMELRDGSDG DSAGCASLAT VSQSSFYGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)