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AT1G70460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.752
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : root hair specific 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
root hair specific 10 (RHS10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G70450.1); Has 376121 Blast hits to 219094 proteins in 6322 species: Archae - 675; Bacteria - 71771; Metazoa - 140962; Fungi - 47170; Plants - 60341; Viruses - 7360; Other Eukaryotes - 47842 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G70460-MONOMERBioGrid:28602EC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC010796EMBL:BX816903
EMBL:CP002684EnsemblPlants:AT1G70460EnsemblPlants:AT1G70460.1entrez:843382GeneID:843382Genevisible:Q9CAL8GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT1G70460.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF36HOGENOM:HOG000116550
InParanoid:Q9CAL8InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G70460
OMA:YVENEVFPaxDb:Q9CAL8Pfam:PF07714Pfam:Q9CAL8Pfscan:PS50011PhylomeDB:Q9CAL8PIR:D96728
PRIDE:Q9CAL8PRO:PR:Q9CAL8PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9CAL8Proteomes:UP000006548
RefSeq:NP_177203.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9CAL8STRING:3702.AT1G70460.1SUPFAM:SSF56112
TAIR:AT1G70460tair10-symbols:RHS10TMHMM:TMhelixUniGene:At.50023UniProt:Q9CAL8
Coordinates (TAIR10) chr1:+:26556155..26558994
Molecular Weight (calculated) 75375.80 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.65
Length 710 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)