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AT1G69930.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase TAU 11
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 11 (GSTU11); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 13 (TAIR:AT1G27130.1); Has 4131 Blast hits to 4115 proteins in 730 species: Archae - 0; Bacteria - 1658; Metazoa - 169; Fungi - 106; Plants - 1950; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G69930-MONOMERBioGrid:28550EC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC010675EMBL:AK119143
EMBL:BT006220EMBL:CP002684EnsemblPlants:AT1G69930EnsemblPlants:AT1G69930.1entrez:843329Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:843329Genevisible:Q9CAS6GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749GO:GO:0009407
GO:GO:0009636Gramene:AT1G69930.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF193HOGENOM:HOG000125749InParanoid:Q9CAS6IntAct:Q9CAS6
InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G69930KO:K00799ncoils:CoilOMA:FIHPENT
PaxDb:Q9CAS6Pfam:PF13417Pfam:Q9CAS6Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9CAS6PIR:G96721
PRO:PR:Q9CAS6PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9CAS6Proteomes:UP000006548RefSeq:NP_177151.1SMR:Q9CAS6
STRING:3702.AT1G69930.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G69930tair10-symbols:ATGSTU11tair10-symbols:GSTU11UniGene:At.20559
UniProt:Q9CAS6
Coordinates (TAIR10) chr1:-:26337735..26338690
Molecular Weight (calculated) 26517.00 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.09
Length 234 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLMNRSKND EYVKLLGAWP SPFVLRTRIA LNLKNVAYEY LEEEDTLSSE SVLNYNPVHK QIPILIHGNK PIRESLNIVM YVDETWLSGP PILPSDPFDR
101: AVARFWDVYI DEHCFTSING VAVAKGEENI NAAIAKLEQC MALLEETFQE CSKGRGFFGG ENIGFIDIGF GSMLGPLTVL EKFTGVKFIH PENTPGLFHW
201: ADRFYAHEAV KPVMPDIEKL VQFARLKFNT SIFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)