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AT1G69870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nitrate transporter 1.7
Curator
Summary (TAIR10)
Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.
Computational
Description (TAIR10)
nitrate transporter 1.7 (NRT1.7); FUNCTIONS IN: low affinity nitrate transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to salt stress, nitrate transport, low affinity nitrate transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.6 (TAIR:AT1G27080.1); Has 4600 Blast hits to 4423 proteins in 820 species: Archae - 0; Bacteria - 1236; Metazoa - 519; Fungi - 428; Plants - 2212; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Protein Annotations
BioGrid:28544eggNOG:COG3104eggNOG:KOG1237EMBL:AC010675EMBL:AY090257EMBL:AY125531EMBL:CP002684
EnsemblPlants:AT1G69870EnsemblPlants:AT1G69870.1entrez:843323GeneID:843323Genevisible:Q8RX77GO:GO:0005886GO:GO:0015293
GO:GO:0015706GO:GO:0016021GO:GO:0042128GO:GO:0080054GO:GO:0080055Gramene:AT1G69870.1hmmpanther:PTHR11654
hmmpanther:PTHR11654:SF20HOGENOM:HOG000237399InParanoid:Q8RX77InterPro:IPR000109InterPro:IPR020846iPTMnet:Q8RX77KEGG:ath:AT1G69870
OMA:KPPICHEPANTHER:PTHR11654PaxDb:Q8RX77Pfam:PF00854Pfam:Q8RX77PhylomeDB:Q8RX77PIR:A96721
PRIDE:Q8RX77PRO:PR:Q8RX77ProteinModelPortal:Q8RX77Proteomes:UP000006548Reactome:R-ATH-427975RefSeq:NP_564979.1SMR:Q8RX77
STRING:3702.AT1G69870.1SUPFAM:SSF103473TAIR:AT1G69870tair10-symbols:NRT1.7TCDB:2.A.17.3.15TMHMM:TMhelixUniGene:At.23012
UniProt:Q8RX77
Coordinates (TAIR10) chr1:+:26316208..26320097
Molecular Weight (calculated) 68420.60 Da
IEP (calculated) 8.82
GRAVY (calculated) 0.25
Length 620 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)