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AT1G69700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.761
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HVA22 homologue C
Curator
Summary (TAIR10)
Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.
Computational
Description (TAIR10)
HVA22 homologue C (HVA22C); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 1462 Blast hits to 1462 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 635; Fungi - 218; Plants - 519; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5052eggNOG:KOG1725EMBL:AC013289EMBL:AF141661EMBL:AF141978EMBL:AY065456EMBL:AY084473
EMBL:AY142652EMBL:CP002684EnsemblPlants:AT1G69700EnsemblPlants:AT1G69700.1entrez:843306GeneID:843306Genevisible:Q9S784
GO:GO:0009414GO:GO:0009506GO:GO:0009737GO:GO:0016021GO:GO:0042538Gramene:AT1G69700.1hmmpanther:PTHR12300
hmmpanther:PTHR12300:SF51HOGENOM:HOG000241758InParanoid:Q9S784InterPro:IPR004345KEGG:ath:AT1G69700OMA:LEWFPIWPANTHER:PTHR12300
PaxDb:Q9S784Pfam:PF03134Pfam:Q9S784PhylomeDB:Q9S784PIR:H96718PRIDE:Q9S784PRO:PR:Q9S784
Proteomes:UP000006548RefSeq:NP_177128.1STRING:3702.AT1G69700.1TAIR:AT1G69700tair10-symbols:ATHVA22Ctair10-symbols:HVA22CTMHMM:TMhelix
UniGene:At.23695UniProt:Q9S784
Coordinates (TAIR10) chr1:+:26220337..26221663
Molecular Weight (calculated) 22034.50 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.33
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSNSGDDNV LQVLIKNFDV LALPLVTLVY PLYASVKAIE TRSLPEDEQW LTYWVLYALI SLFELTFSKP LEWFPIWPYM KLFGICWLVL PQFNGAEHIY
101: KHFIRPFYRD PQRATTKIWY VPHKKFNFFP KRDDDDILTA AEKYMEQHGT EAFERMIVKK DSYERGRSSR GINNHMIFDD DYRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)