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AT1G69680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.632
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; CONTAINS InterPro DOMAIN/s: Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Ran-interacting Mog1 protein (InterPro:IPR007681), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 115; Plants - 49; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111I9ZeggNOG:KOG3329EMBL:AY037246EMBL:AY077648EMBL:AY088021EMBL:CP002684EnsemblPlants:AT1G69680
EnsemblPlants:AT1G69680.1entrez:843304Gene3D:3.40.1000.10GeneID:843304Gramene:AT1G69680.1hmmpanther:PTHR15837hmmpanther:PTHR15837:SF0
HOGENOM:HOG000247047InterPro:IPR007681InterPro:IPR016123KEGG:ath:AT1G69680OMA:NQPPPDNPfam:PF04603PhylomeDB:Q94C15
Proteomes:UP000006548RefSeq:NP_564972.1SMR:Q94C15STRING:3702.AT1G69680.1SUPFAM:SSF55724TAIR:AT1G69680UniGene:At.19184
UniProt:Q94C15
Coordinates (TAIR10) chr1:+:26205148..26206568
Molecular Weight (calculated) 21871.90 Da
IEP (calculated) 4.18
GRAVY (calculated) 0.04
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVELCSVRP LFGGAISTVF PQRFQDVSNI RQVPDHQEVF VDPSRDESLI FELLDFKAEV GDIGSASWFL NDLASEQDAE GFQLIEQSEV IEAPGLSFRN
101: ISAVATTAIG EMAISKGRQG REAQNLVRVY VANIRLKGVD TDVLVTAYEP ILINPLSESA DAVGSGLAVP ASQSGKMPMC DIIKQSLSTF KVNDWNLFGS
201: SA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)