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AT1G69490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC-like, activated by AP3/PI
Curator
Summary (TAIR10)
Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.
Computational
Description (TAIR10)
NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:28503eggNOG:ENOG410IE3BeggNOG:ENOG410YB53EMBL:AC073178EMBL:AF360201EMBL:AJ222713EMBL:AY051015
EMBL:AY086124EMBL:CP002684EnsemblPlants:AT1G69490EnsemblPlants:AT1G69490.1entrez:843282GeneID:843282Genevisible:O49255
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009825GO:GO:0009835GO:GO:0009908
GO:GO:0010150Gramene:AT1G69490.1hmmpanther:PTHR31719hmmpanther:PTHR31719:SF40HOGENOM:HOG000237406InParanoid:O49255InterPro:IPR003441
KEGG:ath:AT1G69490OMA:FPRTCSLPaxDb:O49255Pfam:O49255Pfam:PF02365Pfscan:PS51005PhylomeDB:O49255
PIR:T52343PRIDE:O49255PRO:PR:O49255PROSITE:PS51005ProteinModelPortal:O49255Proteomes:UP000006548RefSeq:NP_564966.1
SMR:O49255STRING:3702.AT1G69490.1SUPFAM:SSF101941TAIR:AT1G69490tair10-symbols:ANAC029tair10-symbols:ATNAPtair10-symbols:NAP
UniGene:At.24919UniProt:O49255
Coordinates (TAIR10) chr1:+:26122233..26123222
Molecular Weight (calculated) 31427.40 Da
IEP (calculated) 6.86
GRAVY (calculated) -0.72
Length 268 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)