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AT1G69450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.710
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Early-responsive to dehydration stress protein (ERD4)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Early-responsive to dehydration stress protein (ERD4); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 1403 Blast hits to 1256 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 667; Plants - 417; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5594eggNOG:KOG1134EMBL:AC073178EMBL:BX814798
EMBL:CP002684EnsemblPlants:AT1G69450EnsemblPlants:AT1G69450.1EnsemblPlants:AT1G69450.2
entrez:843277ExpressionAtlas:F4I248GeneID:843277Genevisible:F4I248
GO:GO:0006811GO:GO:0016021Gramene:AT1G69450.1Gramene:AT1G69450.2
hmmpanther:PTHR13018hmmpanther:PTHR13018:SF45HOGENOM:HOG000241414InParanoid:F4I248
InterPro:IPR003864InterPro:IPR027815InterPro:IPR032880iPTMnet:F4I248
KEGG:ath:AT1G69450OMA:WFTIWNVPaxDb:F4I248Pfam:F4I248
Pfam:PF02714Pfam:PF13967Pfam:PF14703PRIDE:F4I248
PRO:PR:F4I248ProteinModelPortal:F4I248Proteomes:UP000006548RefSeq:NP_001185356.1
RefSeq:NP_177104.2STRING:3702.AT1G69450.1TAIR:AT1G69450TMHMM:TMhelix
UniGene:At.35419UniProt:A0A097NUQ3UniProt:F4I248
Coordinates (TAIR10) chr1:-:26107120..26110006
Molecular Weight (calculated) 81794.90 Da
IEP (calculated) 9.80
GRAVY (calculated) 0.28
Length 711 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLSALLMSV GINSCLCVLL FILYSVLRKQ PRNYEVFLPR RLANGTYKRR RNKVARYIPS LKWIWKSWRP TEKELMESSG LDGVVFMRMI TFSLKVFLFA
101: GIIGVFVLLP VNCFGDQLTV IDYADWSANS LDLFSVANLK VRSQWLWVHF GAIYLVTVFV CCLLYFEFRY IALKRIEHFY SSKPKPEQFT ILVRNIPSSD
201: GSSVSDTVDR FFGENHSSTY FSHVVIHRTS KLRSVVDKAK KLYKEVKHKK PVKKTPMRFF SRKDNTEGHY ESVLQEMEQN IRLGQAEVSA PGKEVRAAFV
301: SFKSRYGAAT ALHMPQSINP TYWLTEPAPE PHDVHWPFFS ASFMQKWLAK ILVVFACLLL TILFLVPVVL VQGLTNLPAL EFMFPFLSLI LSMKVVSQII
401: TGYLPSLILQ TSLKVVPPTM EFLSSIQGHI CHSDIQKSAC NKVIWFTIWN VFFATVFSGS AFYKLSVILD PKQIPLKLAV AVPAQASFFI AYVVTTGWTD
501: TLTELFRVVP FMVSYIKRSF EPSDENEFVV PPMRYHRDTP RVLFFGLLGI TYFFLAPLIL PFILLYFILA YIIYRNQFMN VYAPKFDTGG MFWPMIHYTM
601: IFSLVLMQAI AIGLFALKKM ELATYLLVPL PVFTLLFNEF CRKRFMPIFT DYPAEVLTKR DKEDRNDPTM PEFYNNLVSA YKDPALLPLR FSGSGSRNDS
701: LTSPLLSFSE V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)