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AT1G69440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.693
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Argonaute family protein
Curator
Summary (TAIR10)
Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.
Computational
Description (TAIR10)
ARGONAUTE7 (AGO7); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: production of ta-siRNAs involved in RNA interference, vegetative phase change, production of lsiRNA involved in RNA interference, regulation of development, heterochronic, gene silencing by miRNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2067 Blast hits to 2008 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1082; Fungi - 299; Plants - 502; Viruses - 5; Other Eukaryotes - 179 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XP07eggNOG:KOG1041EMBL:AC073178EMBL:AY394564
EMBL:CP002684EnsemblPlants:AT1G69440EnsemblPlants:AT1G69440.1entrez:843276
Gene3D:3.30.420.10GeneID:843276Genevisible:Q9C793GO:GO:0003723
GO:GO:0005737GO:GO:0006351GO:GO:0006355GO:GO:0010050
GO:GO:0010267GO:GO:0010599GO:GO:0030529GO:GO:0035195
GO:GO:0040034GO:GO:0060145Gramene:AT1G69440.1hmmpanther:PTHR22891
hmmpanther:PTHR22891:SF9HOGENOM:HOG000116043InParanoid:Q9C793InterPro:IPR003100
InterPro:IPR003165InterPro:IPR012337InterPro:IPR014811InterPro:IPR032472
InterPro:IPR032474KEGG:ath:AT1G69440KO:K11593OMA:QCCLYSN
PaxDb:Q9C793Pfam:PF02170Pfam:PF02171Pfam:PF08699
Pfam:PF16486Pfam:PF16488Pfam:Q9C793Pfscan:PS50821
Pfscan:PS50822PhylomeDB:Q9C793PRIDE:Q9C793PRO:PR:Q9C793
PROSITE:PS50821PROSITE:PS50822ProteinModelPortal:Q9C793Proteomes:UP000006548
Reactome:R-ATH-426486Reactome:R-ATH-426496Reactome:R-ATH-5578749RefSeq:NP_177103.1
SMART:SM00949SMART:SM00950SMART:SM01163SMR:Q9C793
STRING:3702.AT1G69440.1SUPFAM:SSF101690SUPFAM:SSF53098TAIR:AT1G69440
tair10-symbols:AGO7tair10-symbols:ZIPUniGene:At.35421UniProt:Q9C793
Coordinates (TAIR10) chr1:-:26101565..26105016
Molecular Weight (calculated) 113403.00 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.47
Length 990 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)