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AT1G69390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20061580 (2010): plastid plastid envelope
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : homologue of bacterial MinE 1
Curator
Summary (TAIR10)
Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.
Computational
Description (TAIR10)
homologue of bacterial MinE 1 (MINE1); CONTAINS InterPro DOMAIN/s: Septum formation topological specificity factor MinE (InterPro:IPR005527); Has 203 Blast hits to 203 proteins in 86 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:28492eggNOG:ENOG410IVD1eggNOG:ENOG41122SREMBL:AB046117EMBL:AC018364EMBL:AC073178EMBL:AY088828
EMBL:BT002897EMBL:BT004467EMBL:CP002684EnsemblPlants:AT1G69390EnsemblPlants:AT1G69390.1entrez:843271GeneID:843271
Genevisible:Q9C4Z7GO:GO:0009507GO:GO:0010020GO:GO:0032955GO:GO:0042802GO:GO:0051117GO:GO:0051301
Gramene:AT1G69390.1hmmpanther:PTHR33404hmmpanther:PTHR33404:SF2HOGENOM:HOG000006027InParanoid:Q9C4Z7IntAct:Q9C4Z7InterPro:IPR005527
KEGG:ath:AT1G69390MINT:MINT-4507043OMA:LAWKIMFPaxDb:Q9C4Z7Pfam:PF03776Pfam:Q9C4Z7PhylomeDB:Q9C4Z7
PRIDE:Q9C4Z7PRO:PR:Q9C4Z7ProteinModelPortal:Q9C4Z7Proteomes:UP000006548RefSeq:NP_564964.1SMR:Q9C4Z7STRING:3702.AT1G69390.1
TAIR:AT1G69390tair10-symbols:ARC12tair10-symbols:ATMINE1tair10-symbols:MINE1UniGene:At.27512UniProt:Q9C4Z7
Coordinates (TAIR10) chr1:+:26084721..26086284
Molecular Weight (calculated) 25749.30 Da
IEP (calculated) 6.80
GRAVY (calculated) -0.42
Length 229 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMSSGTLRI SATLVSPYHH HHRNRLSLPS SSSKVDFTGF ISNGVNSLET QKCTPGLAIS RENTRGQVKV LARNTGDYEL SPSPAEQEIE SFLYNAINMG
101: FFDRLNLAWK IIFPSHASRR SSNARIAKQR LKMILFSDRC DVSDEAKRKI VNNIIHALSD FVEIESEEKV QLNVSTDGDL GTIYSVTVPV RRVKPEYQDV
201: DEAGTITNVE YKDTRDGSVD VRFDFYVPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)