AT1G69340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : appr-1-p processing enzyme family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26066298..26069644 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63308.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||
| Length | 562 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMYQTIPTAP TIRGGTPTES GDYVVTLDQI PRWSDVEQRS SLEDETGDPE HSNPRYANPL ASSSEAGSSG NGMVSKFPVD HEINSRIYLW RGEPWNLEVD 101: AVVNSTNENL DEAHSSPGLH VAAGPGLAEQ CATLGGCRTG MAKVTNAYDL PARRVIHTVG PKYAVKYHTA AENALSHCYR SCLELLIDSG LQSIALGCIY 201: TEAKNYPREP AAHVAIRTVR RFLEKQKDKI SAVVFCTTTS SDTEIYKRLL PLYFPRDEHE EEVAISKLPA DVGDENGETV IDERKIRIQA LPNKPPPRSF 301: PTPLERPSTD LTLLRRNSNH LDSYLDPAFM SLIKDPDERR KEQWEKTAQA QSGFNFVKLL GFGDLGGPPL SAAEEYSLHS RYLAKANSIN LSEIAEMKIV 401: YRGGVDTEGH PVMVVVGAHF LLRCLDLERF VLYVIKEFEP VIQKPYSIVY FHSAASLQVQ PDLGWMKRLE QILGRKHQRN LQAIYVLHPT FHLKATILTM 501: QFFVDNVVWK KVVYADRLLQ LFKYVPREQL TIPDFVFQHD LEVNGGKGLI VDPRTKYVYQ RP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)