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AT1G69270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 15772289
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 15772289
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : receptor-like protein kinase 1
Curator
Summary (TAIR10)
RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1.
Computational
Description (TAIR10)
receptor-like protein kinase 1 (RPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 2 (TAIR:AT3G02130.1); Has 135462 Blast hits to 127527 proteins in 4655 species: Archae - 122; Bacteria - 14490; Metazoa - 45605; Fungi - 10969; Plants - 44066; Viruses - 629; Other Eukaryotes - 19581 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G69270-MONOMERBioGrid:28479EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IEZ9EMBL:AC008262EMBL:AC018364EMBL:AY099858
EMBL:BT008896EMBL:CP002684EMBL:FJ708674EMBL:U55875
EnsemblPlants:AT1G69270EnsemblPlants:AT1G69270.1entrez:843258Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:843258Genevisible:Q9ZRF9GO:GO:0004702
GO:GO:0005524GO:GO:0005777GO:GO:0005886GO:GO:0009409
GO:GO:0009414GO:GO:0009651GO:GO:0009737GO:GO:0009738
GO:GO:0009942GO:GO:0009945GO:GO:0016021GO:GO:0023014
GO:GO:0048508Gramene:AT1G69270.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF205
HOGENOM:HOG000116551InParanoid:Q9ZRF9IntAct:Q9ZRF9InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320
InterPro:IPR017441InterPro:IPR032675KEGG:ath:AT1G69270OMA:NSNCIGH
PaxDb:Q9ZRF9Pfam:PF00069Pfam:PF08263Pfam:Q9ZRF9
Pfscan:PS50011PhylomeDB:Q9ZRF9PIR:G96716PRIDE:Q9ZRF9
PRO:PR:Q9ZRF9PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9ZRF9Proteomes:UP000006548RefSeq:NP_177087.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9ZRF9STRING:3702.AT1G69270.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G69270tair10-symbols:RPK1
TMHMM:TMhelixUniGene:At.16506UniGene:At.66942UniGene:At.74142
UniProt:Q9ZRF9
Coordinates (TAIR10) chr1:-:26040877..26042499
Molecular Weight (calculated) 59745.20 Da
IEP (calculated) 6.63
GRAVY (calculated) 0.08
Length 540 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLLGLVFLL FNLFMFSFSR KLLTESGGGL HDEAALLKLK SSFLDPNGVL SSWVSDSSSN HCSWYGVSCN SDSRVVSLIL RGCDELEGSG VLHLPDLSSC
101: SSSKRRLGGV ISPVVGDLSE IRVLSLSFND LRGEIPKEIW GLEKLEILDL KGNNFIGGIR VVDNVVLRKL MSFEDEDEIG PSSADDDSPG KSGLYPIEIA
201: SIVSASVIVF VLLVLVILFI YTRKWKRNSQ VQVDEIKEIK VFVDIGIPLT YEIIVRATGY FSNSNCIGHG GFGSTYKAEV SPTNVFAVKR LSVGRFQGDQ
301: QFHAEISALE MVRHPNLVML IGYHASETEM FLIYNYLSGG NLQDFIKERS KAAIEWKVLH KIALDVARAL SYLHEQCSPK VLHRDIKPSN ILLDNNYNAY
401: LSDFGLSKLL GTSQSHVTTG VAGTFGYVAP EYAMTCRVSE KADVYSYGIV LLELISDKRA LDPSFSSHEN GFNIVSWAHM MLSQGKAKEV FTTGLWETGP
501: PDDLVEVLHL ALKCTVDSLS IRPTMKQAVR LLKRIQPSRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)