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AT1G69160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ60eggNOG:ENOG410ZFMSEMBL:AC008262EMBL:AY058166EMBL:AY093178EMBL:BT003390EMBL:CP002684
EnsemblPlants:AT1G69160EnsemblPlants:AT1G69160.1entrez:843247GeneID:843247Genevisible:Q93Z37GO:GO:0005886GO:GO:0009734
GO:GO:0010929GO:GO:0060918Gramene:AT1G69160.1hmmpanther:PTHR33541hmmpanther:PTHR33541:SF3HOGENOM:HOG000090775iPTMnet:Q93Z37
KEGG:ath:AT1G69160OMA:DYSWLDEPaxDb:Q93Z37PhylomeDB:Q93Z37PIR:E96715ProteinModelPortal:Q93Z37Proteomes:UP000006548
RefSeq:NP_564952.1TAIR:AT1G69160UniGene:At.26613UniProt:Q93Z37
Coordinates (TAIR10) chr1:+:26000315..26001280
Molecular Weight (calculated) 36328.80 Da
IEP (calculated) 8.80
GRAVY (calculated) -1.08
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MSMKGISSAE SDKLSRRISL THKRNSEELD VFEAAVYFGY NEASSGDHGH TQKYGYNAAR EENPRRWGIL GGGRRISLDL PIRCSEQVYH LQQDHHEKHE
101: VTTIKERLGN VRHKQPSSPG GKIASFLNSL FHQAGSKKNK SKSKSKTKPT DPEVEEEIPG GGWMRRRRRS SISHFFSSSR STSTTTTTTA SSSSKSLISS
201: SSSGFRTPPP YLNTPTKNYK QFLNYTSATK QVGEEETKTN KEYSWLDEKL KVMESLSENQ RIWSDDEDID DDRRIKREGE DDGMESDSSS DLFELQNYEL
301: SRGGLPVYET TNVANINKTH I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)