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AT1G69040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ACT domain repeat 4
Curator
Summary (TAIR10)
ACT-domain containing protein involved in feedback regulation of amino acid metabolism
Computational
Description (TAIR10)
ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 2469 Blast hits to 1537 proteins in 400 species: Archae - 0; Bacteria - 1346; Metazoa - 0; Fungi - 0; Plants - 646; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IINIeggNOG:ENOG410Y95GEMBL:AC008262EMBL:AF528060EMBL:AK118644EMBL:BT029177EMBL:CP002684
EnsemblPlants:AT1G69040EnsemblPlants:AT1G69040.1entrez:843236ExpressionAtlas:Q8LJW3GeneID:843236Genevisible:Q8LJW3GO:GO:0008152
GO:GO:0009506GO:GO:0016597hmmpanther:PTHR31096hmmpanther:PTHR31096:SF13HOGENOM:HOG000239159InterPro:IPR002912iPTMnet:Q8LJW3
KEGG:ath:AT1G69040PaxDb:Q8LJW3Pfam:PF01842Pfam:PF13740Pfam:Q8LJW3Pfscan:PS51671PhylomeDB:Q8LJW3
PIR:H96714PRIDE:Q8LJW3PRO:PR:Q8LJW3PROSITE:PS51671ProteinModelPortal:Q8LJW3Proteomes:UP000006548RefSeq:NP_177067.1
SMR:Q8LJW3SUPFAM:SSF55021TAIR:AT1G69040tair10-symbols:ACR4UniGene:At.35453UniProt:Q8LJW3
Coordinates (TAIR10) chr1:+:25958196..25960079
Molecular Weight (calculated) 50823.30 Da
IEP (calculated) 6.08
GRAVY (calculated) -0.40
Length 451 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFSQDMDNE YEKLIRRMNP PRVVIDNDSC KKATVIRVDS ANEYGILLEV VQILTDLNLT ITKAYISSDG GWFMDVFNVT DQDGNKVTDE VVLDYIQKSL
101: GPEACFSTSM RSVGVIPSTD STVIELTGCD RPGLLSELSA VLTHLKCSVL NAEIWTHNTR AAAVMQVTDD LTGCGISDPE RLSRIKNLLR NVLKGSNTPR
201: EAKTVVSHGE VHTDRRLHQM MFEDRDYEHR LVDDDSSIQD ERQRPDVCVD NWLDKDYSVV TVRCKDRPKL LFDTVCTLTD MQYVVFHGSV DTEGTEAFQE
301: YYVRHIDGSP VKSEAEKQRV IQCLEAAIKR RVSEGLKLEL CTTDRVGLLS NVTRIFRENS LTVTRAEVKT KGGKALNTFY VSDASGYSID AKTIDSIRQT
401: IGQTILKVKN NPQEQQQRQK SPSHESPTRF LFGGLFKSKS FVNFGLVRSY S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)