AT1G69030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.961 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : BSD domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BSD domain-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 264 Blast hits to 264 proteins in 50 species: Archae - 4; Bacteria - 7; Metazoa - 53; Fungi - 11; Plants - 174; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25947429..25949262 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34769.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.42 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||||||
| Length | 317 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDLWKRAKS FAEEAAKKSQ TITLQSSSTT FVNLVTETAK KSKEFALEAS KKADSINVSE FVAETAKKSK EFAAEVSTKA DQLKVVALKQ ADQIQNIKSI 101: ADIIPGGLGG SGSGGGGSEI SESELVSFGI TDDLREFVKG LTSATFQAFP EQDESSEVSD LETSASNVRK DLSEWQERHA TLVLGSVKQI SKLRYELCPR 201: VMKERRFWRI YFTLVSTHVA PYERKYMEEL RNKAESKDEE AKKSPGLGRT ESAEKNRIST ASSEQDLDTF LLGDLEDSDE APDDGDGDDG GSLGDDDFDK 301: IGNSDVEEEK ESNAAKN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)