AT1G69020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Prolyl oligopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25943949..25947197 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85876.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.21 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||||||
| Length | 757 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVTYLLRRY KPATISSVLS FSTKCFVGRT SSLSVPTEAP PVPKKIPFAI SSHGITRQDP FHWMKNTDDT DFVDFLKREN SYSQAFMADT ETLRRDLFSE 101: MKTRIPEEIF TPPERWGQWL YRQYIPKGKE YPLLCRRLEK GKTNWLSGLF RGEEEEVVLD WNQIAEQFGY VHVGVCRVSP DHNYLAYTVD PEGDGITLFY 201: TVTDENQRPH RVVVTNVESD GRDDAVVFTE RDSSFCVDIT TTKDGKFVTI NSNSRTSSEV YIVNADKPMA GLQRTRERVP GVQCFLEHHN GFFYILTNSP 301: SNAISEWSGE GYYLTRCLVE EIEASDWQTV FRPDDDVVIQ DMDMFNDYLV LYLNKKGLPM LCSIDMPIKA NTKHMDDLVP WYFPLPVDSC SVAPGSNHDF 401: QSSIYRVVLS SPVIPDTIVD YDVSRRLFSI VQQEGGVVDN SDSSKPWYTA DRSTENNGQL NDRTSEGEDG QLDSRMPKWE DLSDTYVCER QEVSSHDGVE 501: VPLTILYSRE AWKKSESPGM LIGYGAYGEV LDKSWCTNRL SMLDRGWVIA FADVRGGGSG EFSWHKSGTR SLKQNSIQDF IYSAKYLVEK GYVHRHHLAA 601: VGYSAGAILP AAAMNMHPSL FQAVILKVPF VDVLNTLSDP NLPLTLLDHE EFGNPDNQTD FGSILSYSPY DKIRKDVCYP SMLVTTSFHD SRVGVWEGAK 701: WVAKIRDSTC HDCSRAVILK TNMNGGHFGE GGRYAQCEET AFDYAFLLKV MGHHNNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)