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AT1G68830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26987276 (2016): plastid
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21531424 (2011): plastid
  • PMID:18431481 (2008): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : STT7 homolog STN7
Curator
Summary (TAIR10)
STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation
Computational
Description (TAIR10)
STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G68830-MONOMERBioGrid:28436EC:2.7.11.1eggNOG:ENOG410XPP3eggNOG:KOG0594EMBL:AC011665EMBL:AC011914
EMBL:AK221920EMBL:BT030352EMBL:CP002684EnsemblPlants:AT1G68830EnsemblPlants:AT1G68830.1entrez:843215GeneID:843215
Genevisible:Q9S713GO:GO:0004672GO:GO:0004674GO:GO:0005524GO:GO:0007623GO:GO:0009507GO:GO:0009535
GO:GO:0042548Gramene:AT1G68830.1hmmpanther:PTHR11584hmmpanther:PTHR11584:SF316HOGENOM:HOG000029907InParanoid:Q9S713IntAct:Q9S713
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9S713KEGG:ath:AT1G68830MINT:MINT-8059427
OMA:RACANSCPaxDb:Q9S713Pfam:PF00069Pfam:Q9S713Pfscan:PS50011PhylomeDB:Q9S713PIR:A96713
PRIDE:Q9S713PRO:PR:Q9S713PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9S713Proteomes:UP000006548
RefSeq:NP_564946.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9S713STRING:3702.AT1G68830.1SUPFAM:SSF56112
TAIR:AT1G68830tair10-symbols:STN7UniGene:At.27657UniProt:Q9S713
Coordinates (TAIR10) chr1:-:25872654..25875473
Molecular Weight (calculated) 63255.70 Da
IEP (calculated) 9.78
GRAVY (calculated) -0.19
Length 562 amino acids
Sequence (TAIR10)
(BLAST)
001: MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLD
201: KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
301: AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR
401: KLVEPRASAD LRRGFELVDL DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE AANWVIQLMA KNGTEKDGGF
501: TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE TIDEISDGRK TVWWNRWIPR EE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)